Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS01530

Experiment: Erythromycin stress 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS01525 and ABZR88_RS01530 are separated by 84 nucleotidesABZR88_RS01530 and ABZR88_RS01535 are separated by 170 nucleotides ABZR88_RS01525: ABZR88_RS01525 - TolC family protein, at 348,497 to 349,867 _RS01525 ABZR88_RS01530: ABZR88_RS01530 - polysaccharide deacetylase family protein, at 349,952 to 350,572 _RS01530 ABZR88_RS01535: ABZR88_RS01535 - 2-oxoglutarate dehydrogenase E1 component, at 350,743 to 353,547 _RS01535 Position (kb) 349 350 351Strain fitness (log2 ratio) -2 -1 0 1at 348.969 kb on + strand, within ABZR88_RS01525at 348.970 kb on - strand, within ABZR88_RS01525at 349.151 kb on + strand, within ABZR88_RS01525at 349.174 kb on + strand, within ABZR88_RS01525at 349.321 kb on + strand, within ABZR88_RS01525at 349.604 kb on - strand, within ABZR88_RS01525at 349.867 kb on + strandat 349.989 kb on + strandat 350.102 kb on + strand, within ABZR88_RS01530at 350.137 kb on + strand, within ABZR88_RS01530at 350.138 kb on - strand, within ABZR88_RS01530at 350.138 kb on - strand, within ABZR88_RS01530at 350.204 kb on - strand, within ABZR88_RS01530at 350.284 kb on + strand, within ABZR88_RS01530at 350.285 kb on - strand, within ABZR88_RS01530at 350.586 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Erythromycin stress 0.05 mg/ml
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348,969 + ABZR88_RS01525 0.34 +0.3
348,970 - ABZR88_RS01525 0.35 +1.2
349,151 + ABZR88_RS01525 0.48 +0.5
349,174 + ABZR88_RS01525 0.49 +1.5
349,321 + ABZR88_RS01525 0.60 -0.2
349,604 - ABZR88_RS01525 0.81 +0.4
349,867 + +0.8
349,989 + -1.6
350,102 + ABZR88_RS01530 0.24 +0.1
350,137 + ABZR88_RS01530 0.30 -1.1
350,138 - ABZR88_RS01530 0.30 -1.0
350,138 - ABZR88_RS01530 0.30 -1.6
350,204 - ABZR88_RS01530 0.41 +0.4
350,284 + ABZR88_RS01530 0.53 -1.4
350,285 - ABZR88_RS01530 0.54 -1.8
350,586 - +0.5

Or see this region's nucleotide sequence