Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS16150
Experiment: Trimethoprim stress 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Trimethoprim stress 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,975,765 | + | ABZR88_RS16145 | 0.34 | -0.2 | |
3,975,776 | + | ABZR88_RS16145 | 0.35 | +0.1 | |
3,976,051 | - | ABZR88_RS16145 | 0.59 | -0.1 | |
3,976,068 | + | ABZR88_RS16145 | 0.60 | +1.0 | |
3,976,069 | - | ABZR88_RS16145 | 0.60 | +0.3 | |
3,976,120 | + | ABZR88_RS16145 | 0.65 | -0.1 | |
3,976,378 | + | ABZR88_RS16145 | 0.87 | -0.7 | |
3,976,424 | - | -0.6 | |||
3,976,648 | + | -0.5 | |||
3,976,754 | + | -0.1 | |||
3,976,754 | + | -0.6 | |||
3,976,799 | - | -0.2 | |||
3,977,066 | - | ABZR88_RS16150 | 0.24 | +0.4 | |
3,977,104 | - | ABZR88_RS16150 | 0.27 | -0.6 | |
3,977,153 | + | ABZR88_RS16150 | 0.31 | -0.2 | |
3,977,209 | + | ABZR88_RS16150 | 0.35 | -0.2 | |
3,977,331 | - | ABZR88_RS16150 | 0.44 | +0.5 | |
3,977,539 | - | ABZR88_RS16150 | 0.60 | -0.9 | |
3,977,593 | - | ABZR88_RS16150 | 0.64 | +1.3 | |
3,977,610 | - | ABZR88_RS16150 | 0.65 | -0.4 | |
3,977,684 | + | ABZR88_RS16150 | 0.71 | -0.5 | |
3,977,725 | - | ABZR88_RS16150 | 0.74 | -0.3 | |
3,978,372 | - | ABZR88_RS16155 | 0.16 | -0.0 | |
3,978,907 | + | ABZR88_RS16155 | 0.51 | -0.8 |
Or see this region's nucleotide sequence