Experiment: Quercetin stress 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS02770 and ABZR88_RS02775 are separated by 85 nucleotides ABZR88_RS02775 and ABZR88_RS02780 overlap by 11 nucleotides ABZR88_RS02780 and ABZR88_RS02785 are separated by 53 nucleotides ABZR88_RS02785 and ABZR88_RS02790 are separated by 92 nucleotides
ABZR88_RS02770: ABZR88_RS02770 - LexA family transcriptional regulator, at 651,145 to 651,924
_RS02770
ABZR88_RS02775: ABZR88_RS02775 - nuclease, at 652,010 to 652,369
_RS02775
ABZR88_RS02780: ABZR88_RS02780 - peptide-methionine (R)-S-oxide reductase MsrB, at 652,359 to 652,844
_RS02780
ABZR88_RS02785: ABZR88_RS02785 - fasciclin domain-containing protein, at 652,898 to 653,482
_RS02785
ABZR88_RS02790: ABZR88_RS02790 - PD40 domain-containing protein, at 653,575 to 656,784
_RS02790
Position (kb) 652
653 Strain fitness (log2 ratio) -2
-1
0
1 at 651.619 kb on - strand, within ABZR88_RS02770 at 651.738 kb on + strand, within ABZR88_RS02770 at 652.025 kb on + strand at 652.032 kb on + strand at 652.052 kb on - strand, within ABZR88_RS02775 at 652.083 kb on + strand, within ABZR88_RS02775 at 652.210 kb on - strand, within ABZR88_RS02775 at 652.288 kb on - strand, within ABZR88_RS02775 at 652.368 kb on - strand at 652.589 kb on + strand, within ABZR88_RS02780 at 652.621 kb on + strand, within ABZR88_RS02780 at 652.697 kb on - strand, within ABZR88_RS02780 at 652.797 kb on + strand at 652.825 kb on - strand at 652.844 kb on + strand at 652.906 kb on + strand at 653.012 kb on + strand, within ABZR88_RS02785 at 653.039 kb on - strand, within ABZR88_RS02785 at 653.066 kb on - strand, within ABZR88_RS02785 at 653.068 kb on + strand, within ABZR88_RS02785 at 653.068 kb on + strand, within ABZR88_RS02785 at 653.149 kb on + strand, within ABZR88_RS02785 at 653.150 kb on - strand, within ABZR88_RS02785 at 653.296 kb on + strand, within ABZR88_RS02785 at 653.319 kb on + strand, within ABZR88_RS02785 at 653.482 kb on + strand at 653.483 kb on - strand at 653.494 kb on + strand at 653.662 kb on - strand at 653.723 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Quercetin stress 0.05 mg/ml remove 651,619 - ABZR88_RS02770 0.61 +0.9 651,738 + ABZR88_RS02770 0.76 +1.2 652,025 + -1.2 652,032 + -0.3 652,052 - ABZR88_RS02775 0.12 -0.1 652,083 + ABZR88_RS02775 0.20 -0.3 652,210 - ABZR88_RS02775 0.56 -1.9 652,288 - ABZR88_RS02775 0.77 +0.1 652,368 - -0.4 652,589 + ABZR88_RS02780 0.47 -0.4 652,621 + ABZR88_RS02780 0.54 -0.3 652,697 - ABZR88_RS02780 0.70 -0.3 652,797 + -0.4 652,825 - +0.2 652,844 + +0.4 652,906 + -0.3 653,012 + ABZR88_RS02785 0.19 -0.1 653,039 - ABZR88_RS02785 0.24 +0.1 653,066 - ABZR88_RS02785 0.29 -0.2 653,068 + ABZR88_RS02785 0.29 -1.5 653,068 + ABZR88_RS02785 0.29 -0.7 653,149 + ABZR88_RS02785 0.43 -0.8 653,150 - ABZR88_RS02785 0.43 +0.3 653,296 + ABZR88_RS02785 0.68 -1.0 653,319 + ABZR88_RS02785 0.72 -0.7 653,482 + -0.8 653,483 - +0.1 653,494 + -1.2 653,662 - -1.7 653,723 + -1.7
Or see this region's nucleotide sequence