Experiment: potassium fluoride stress 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS19610 and ABZR88_RS19615 are separated by 242 nucleotides ABZR88_RS19615 and ABZR88_RS19620 are separated by 104 nucleotides ABZR88_RS19620 and ABZR88_RS19625 are separated by 154 nucleotides
ABZR88_RS19610: ABZR88_RS19610 - heavy metal-binding domain-containing protein, at 4,766,168 to 4,766,416
_RS19610
ABZR88_RS19615: ABZR88_RS19615 - hypothetical protein, at 4,766,659 to 4,767,039
_RS19615
ABZR88_RS19620: ABZR88_RS19620 - hypothetical protein, at 4,767,144 to 4,767,641
_RS19620
ABZR88_RS19625: ABZR88_RS19625 - hypothetical protein, at 4,767,796 to 4,768,806
_RS19625
Position (kb)
4767
4768 Strain fitness (log2 ratio)
-1
0
1 at 4766.227 kb on + strand, within ABZR88_RS19610 at 4766.290 kb on - strand, within ABZR88_RS19610 at 4766.370 kb on - strand, within ABZR88_RS19610 at 4766.429 kb on + strand at 4766.511 kb on - strand at 4766.538 kb on + strand at 4766.597 kb on - strand at 4766.859 kb on + strand, within ABZR88_RS19615 at 4766.860 kb on - strand, within ABZR88_RS19615 at 4766.934 kb on - strand, within ABZR88_RS19615 at 4766.975 kb on - strand, within ABZR88_RS19615 at 4767.000 kb on + strand, within ABZR88_RS19615 at 4767.001 kb on - strand, within ABZR88_RS19615 at 4767.044 kb on + strand at 4767.109 kb on + strand at 4767.211 kb on - strand, within ABZR88_RS19620 at 4767.211 kb on - strand, within ABZR88_RS19620 at 4767.237 kb on + strand, within ABZR88_RS19620 at 4767.371 kb on + strand, within ABZR88_RS19620 at 4767.659 kb on - strand at 4767.695 kb on + strand at 4767.696 kb on - strand at 4767.745 kb on + strand at 4767.793 kb on - strand at 4767.828 kb on - strand at 4767.853 kb on - strand at 4767.854 kb on + strand at 4767.880 kb on - strand at 4768.003 kb on + strand, within ABZR88_RS19625 at 4768.027 kb on + strand, within ABZR88_RS19625 at 4768.028 kb on - strand, within ABZR88_RS19625 at 4768.110 kb on + strand, within ABZR88_RS19625 at 4768.111 kb on - strand, within ABZR88_RS19625 at 4768.111 kb on - strand, within ABZR88_RS19625 at 4768.111 kb on - strand, within ABZR88_RS19625 at 4768.300 kb on - strand, within ABZR88_RS19625 at 4768.300 kb on - strand, within ABZR88_RS19625 at 4768.314 kb on + strand, within ABZR88_RS19625 at 4768.314 kb on + strand, within ABZR88_RS19625 at 4768.331 kb on + strand, within ABZR88_RS19625 at 4768.531 kb on + strand, within ABZR88_RS19625 at 4768.616 kb on + strand, within ABZR88_RS19625
Per-strain Table
Position Strand Gene LocusTag Fraction potassium fluoride stress 30 mM remove 4,766,227 + ABZR88_RS19610 0.24 -0.0 4,766,290 - ABZR88_RS19610 0.49 -0.6 4,766,370 - ABZR88_RS19610 0.81 -1.1 4,766,429 + -0.3 4,766,511 - -1.4 4,766,538 + -0.0 4,766,597 - -1.6 4,766,859 + ABZR88_RS19615 0.52 -0.4 4,766,860 - ABZR88_RS19615 0.53 +0.1 4,766,934 - ABZR88_RS19615 0.72 +0.1 4,766,975 - ABZR88_RS19615 0.83 +0.1 4,767,000 + ABZR88_RS19615 0.90 +0.1 4,767,001 - ABZR88_RS19615 0.90 +0.5 4,767,044 + -0.2 4,767,109 + -0.1 4,767,211 - ABZR88_RS19620 0.13 +0.1 4,767,211 - ABZR88_RS19620 0.13 -0.3 4,767,237 + ABZR88_RS19620 0.19 -0.4 4,767,371 + ABZR88_RS19620 0.46 -0.8 4,767,659 - -0.1 4,767,695 + +0.2 4,767,696 - +0.1 4,767,745 + +1.0 4,767,793 - -0.3 4,767,828 - -0.1 4,767,853 - -0.1 4,767,854 + -0.5 4,767,880 - -1.0 4,768,003 + ABZR88_RS19625 0.20 -0.3 4,768,027 + ABZR88_RS19625 0.23 +0.0 4,768,028 - ABZR88_RS19625 0.23 -0.2 4,768,110 + ABZR88_RS19625 0.31 +0.3 4,768,111 - ABZR88_RS19625 0.31 +0.2 4,768,111 - ABZR88_RS19625 0.31 +0.4 4,768,111 - ABZR88_RS19625 0.31 -0.2 4,768,300 - ABZR88_RS19625 0.50 +0.0 4,768,300 - ABZR88_RS19625 0.50 +0.1 4,768,314 + ABZR88_RS19625 0.51 +1.1 4,768,314 + ABZR88_RS19625 0.51 +0.2 4,768,331 + ABZR88_RS19625 0.53 +0.3 4,768,531 + ABZR88_RS19625 0.73 -0.1 4,768,616 + ABZR88_RS19625 0.81 -0.7
Or see this region's nucleotide sequence