Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS19620

Experiment: potassium fluoride stress 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS19610 and ABZR88_RS19615 are separated by 242 nucleotidesABZR88_RS19615 and ABZR88_RS19620 are separated by 104 nucleotidesABZR88_RS19620 and ABZR88_RS19625 are separated by 154 nucleotides ABZR88_RS19610: ABZR88_RS19610 - heavy metal-binding domain-containing protein, at 4,766,168 to 4,766,416 _RS19610 ABZR88_RS19615: ABZR88_RS19615 - hypothetical protein, at 4,766,659 to 4,767,039 _RS19615 ABZR88_RS19620: ABZR88_RS19620 - hypothetical protein, at 4,767,144 to 4,767,641 _RS19620 ABZR88_RS19625: ABZR88_RS19625 - hypothetical protein, at 4,767,796 to 4,768,806 _RS19625 Position (kb) 4767 4768Strain fitness (log2 ratio) -1 0 1at 4766.227 kb on + strand, within ABZR88_RS19610at 4766.290 kb on - strand, within ABZR88_RS19610at 4766.370 kb on - strand, within ABZR88_RS19610at 4766.429 kb on + strandat 4766.511 kb on - strandat 4766.538 kb on + strandat 4766.597 kb on - strandat 4766.859 kb on + strand, within ABZR88_RS19615at 4766.860 kb on - strand, within ABZR88_RS19615at 4766.934 kb on - strand, within ABZR88_RS19615at 4766.975 kb on - strand, within ABZR88_RS19615at 4767.000 kb on + strand, within ABZR88_RS19615at 4767.001 kb on - strand, within ABZR88_RS19615at 4767.044 kb on + strandat 4767.109 kb on + strandat 4767.211 kb on - strand, within ABZR88_RS19620at 4767.211 kb on - strand, within ABZR88_RS19620at 4767.237 kb on + strand, within ABZR88_RS19620at 4767.371 kb on + strand, within ABZR88_RS19620at 4767.659 kb on - strandat 4767.695 kb on + strandat 4767.696 kb on - strandat 4767.745 kb on + strandat 4767.793 kb on - strandat 4767.828 kb on - strandat 4767.853 kb on - strandat 4767.854 kb on + strandat 4767.880 kb on - strandat 4768.003 kb on + strand, within ABZR88_RS19625at 4768.027 kb on + strand, within ABZR88_RS19625at 4768.028 kb on - strand, within ABZR88_RS19625at 4768.110 kb on + strand, within ABZR88_RS19625at 4768.111 kb on - strand, within ABZR88_RS19625at 4768.111 kb on - strand, within ABZR88_RS19625at 4768.111 kb on - strand, within ABZR88_RS19625at 4768.300 kb on - strand, within ABZR88_RS19625at 4768.300 kb on - strand, within ABZR88_RS19625at 4768.314 kb on + strand, within ABZR88_RS19625at 4768.314 kb on + strand, within ABZR88_RS19625at 4768.331 kb on + strand, within ABZR88_RS19625at 4768.531 kb on + strand, within ABZR88_RS19625at 4768.616 kb on + strand, within ABZR88_RS19625

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Per-strain Table

Position Strand Gene LocusTag Fraction potassium fluoride stress 30 mM
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4,766,227 + ABZR88_RS19610 0.24 -0.0
4,766,290 - ABZR88_RS19610 0.49 -0.6
4,766,370 - ABZR88_RS19610 0.81 -1.1
4,766,429 + -0.3
4,766,511 - -1.4
4,766,538 + -0.0
4,766,597 - -1.6
4,766,859 + ABZR88_RS19615 0.52 -0.4
4,766,860 - ABZR88_RS19615 0.53 +0.1
4,766,934 - ABZR88_RS19615 0.72 +0.1
4,766,975 - ABZR88_RS19615 0.83 +0.1
4,767,000 + ABZR88_RS19615 0.90 +0.1
4,767,001 - ABZR88_RS19615 0.90 +0.5
4,767,044 + -0.2
4,767,109 + -0.1
4,767,211 - ABZR88_RS19620 0.13 +0.1
4,767,211 - ABZR88_RS19620 0.13 -0.3
4,767,237 + ABZR88_RS19620 0.19 -0.4
4,767,371 + ABZR88_RS19620 0.46 -0.8
4,767,659 - -0.1
4,767,695 + +0.2
4,767,696 - +0.1
4,767,745 + +1.0
4,767,793 - -0.3
4,767,828 - -0.1
4,767,853 - -0.1
4,767,854 + -0.5
4,767,880 - -1.0
4,768,003 + ABZR88_RS19625 0.20 -0.3
4,768,027 + ABZR88_RS19625 0.23 +0.0
4,768,028 - ABZR88_RS19625 0.23 -0.2
4,768,110 + ABZR88_RS19625 0.31 +0.3
4,768,111 - ABZR88_RS19625 0.31 +0.2
4,768,111 - ABZR88_RS19625 0.31 +0.4
4,768,111 - ABZR88_RS19625 0.31 -0.2
4,768,300 - ABZR88_RS19625 0.50 +0.0
4,768,300 - ABZR88_RS19625 0.50 +0.1
4,768,314 + ABZR88_RS19625 0.51 +1.1
4,768,314 + ABZR88_RS19625 0.51 +0.2
4,768,331 + ABZR88_RS19625 0.53 +0.3
4,768,531 + ABZR88_RS19625 0.73 -0.1
4,768,616 + ABZR88_RS19625 0.81 -0.7

Or see this region's nucleotide sequence