Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS01065

Experiment: potassium fluoride stress 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS01060 and ABZR88_RS01065 are separated by 4 nucleotidesABZR88_RS01065 and ABZR88_RS01070 are separated by 341 nucleotides ABZR88_RS01060: ABZR88_RS01060 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 233,690 to 236,488 _RS01060 ABZR88_RS01065: ABZR88_RS01065 - IS200/IS605 family transposase, at 236,493 to 236,954 _RS01065 ABZR88_RS01070: ABZR88_RS01070 - glycoside hydrolase family 78 protein, at 237,296 to 240,022 _RS01070 Position (kb) 236 237Strain fitness (log2 ratio) -1 0 1at 235.560 kb on - strand, within ABZR88_RS01060at 235.607 kb on + strand, within ABZR88_RS01060at 235.679 kb on - strand, within ABZR88_RS01060at 235.890 kb on + strand, within ABZR88_RS01060at 236.080 kb on - strand, within ABZR88_RS01060at 236.417 kb on + strandat 236.466 kb on - strandat 236.487 kb on - strandat 236.588 kb on + strand, within ABZR88_RS01065at 236.717 kb on - strand, within ABZR88_RS01065at 236.819 kb on - strand, within ABZR88_RS01065at 236.897 kb on - strand, within ABZR88_RS01065at 237.079 kb on - strandat 237.305 kb on - strandat 237.316 kb on - strandat 237.316 kb on - strandat 237.469 kb on - strandat 237.486 kb on + strandat 237.514 kb on + strandat 237.563 kb on - strandat 237.824 kb on - strand, within ABZR88_RS01070at 237.917 kb on - strand, within ABZR88_RS01070

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Per-strain Table

Position Strand Gene LocusTag Fraction potassium fluoride stress 30 mM
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235,560 - ABZR88_RS01060 0.67 +0.0
235,607 + ABZR88_RS01060 0.68 -0.8
235,679 - ABZR88_RS01060 0.71 +0.1
235,890 + ABZR88_RS01060 0.79 -0.3
236,080 - ABZR88_RS01060 0.85 -0.3
236,417 + +0.1
236,466 - -0.9
236,487 - -0.9
236,588 + ABZR88_RS01065 0.21 -0.4
236,717 - ABZR88_RS01065 0.48 +0.1
236,819 - ABZR88_RS01065 0.71 -0.2
236,897 - ABZR88_RS01065 0.87 -0.0
237,079 - -0.5
237,305 - -0.4
237,316 - -0.1
237,316 - -0.7
237,469 - +0.2
237,486 + -0.1
237,514 + -0.1
237,563 - +1.2
237,824 - ABZR88_RS01070 0.19 -0.3
237,917 - ABZR88_RS01070 0.23 +0.3

Or see this region's nucleotide sequence