Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05769 and MPMX19_05770 are separated by 470 nucleotides MPMX19_05770 and MPMX19_05771 are separated by 26 nucleotides MPMX19_05771 and MPMX19_05772 overlap by 1 nucleotides
MPMX19_05769: MPMX19_05769 - hypothetical protein, at 492,436 to 493,035
_05769
MPMX19_05770: MPMX19_05770 - 1,2-phenylacetyl-CoA epoxidase, subunit A, at 493,506 to 494,519
_05770
MPMX19_05771: MPMX19_05771 - 1,2-phenylacetyl-CoA epoxidase, subunit B, at 494,546 to 494,833
_05771
MPMX19_05772: MPMX19_05772 - 1,2-phenylacetyl-CoA epoxidase, subunit C, at 494,833 to 495,597
_05772
Position (kb) 493
494
495 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.529 kb on + strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.530 kb on - strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.973 kb on + strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 492.974 kb on - strand, within MPMX19_05769 at 493.226 kb on + strand at 493.227 kb on - strand at 493.452 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.509 kb on + strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.510 kb on - strand at 493.812 kb on + strand, within MPMX19_05770 at 493.812 kb on + strand, within MPMX19_05770 at 493.812 kb on + strand, within MPMX19_05770 at 493.812 kb on + strand, within MPMX19_05770 at 493.812 kb on + strand, within MPMX19_05770 at 493.812 kb on + strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.813 kb on - strand, within MPMX19_05770 at 493.818 kb on + strand, within MPMX19_05770 at 493.818 kb on + strand, within MPMX19_05770 at 493.819 kb on - strand, within MPMX19_05770 at 493.819 kb on - strand, within MPMX19_05770 at 493.819 kb on - strand, within MPMX19_05770 at 493.890 kb on + strand, within MPMX19_05770 at 493.890 kb on + strand, within MPMX19_05770 at 493.890 kb on + strand, within MPMX19_05770 at 493.891 kb on - strand, within MPMX19_05770 at 493.908 kb on + strand, within MPMX19_05770 at 493.908 kb on + strand, within MPMX19_05770 at 493.908 kb on + strand, within MPMX19_05770 at 493.909 kb on - strand, within MPMX19_05770 at 494.001 kb on + strand, within MPMX19_05770 at 494.001 kb on + strand, within MPMX19_05770 at 494.001 kb on + strand, within MPMX19_05770 at 494.001 kb on + strand, within MPMX19_05770 at 494.001 kb on + strand, within MPMX19_05770 at 494.001 kb on + strand, within MPMX19_05770 at 494.002 kb on - strand, within MPMX19_05770 at 494.010 kb on + strand, within MPMX19_05770 at 494.010 kb on + strand, within MPMX19_05770 at 494.010 kb on + strand, within MPMX19_05770 at 494.010 kb on + strand, within MPMX19_05770 at 494.010 kb on + strand, within MPMX19_05770 at 494.010 kb on + strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.011 kb on - strand, within MPMX19_05770 at 494.067 kb on + strand, within MPMX19_05770 at 494.067 kb on + strand, within MPMX19_05770 at 494.067 kb on + strand, within MPMX19_05770 at 494.068 kb on - strand, within MPMX19_05770 at 494.340 kb on + strand, within MPMX19_05770 at 494.341 kb on - strand, within MPMX19_05770 at 494.341 kb on - strand, within MPMX19_05770 at 494.341 kb on - strand, within MPMX19_05770 at 494.341 kb on - strand, within MPMX19_05770 at 494.545 kb on + strand at 494.545 kb on + strand at 494.545 kb on + strand at 494.554 kb on + strand at 494.554 kb on + strand at 494.555 kb on - strand at 494.555 kb on - strand at 494.672 kb on + strand, within MPMX19_05771 at 494.672 kb on + strand, within MPMX19_05771 at 494.672 kb on + strand, within MPMX19_05771 at 494.672 kb on + strand, within MPMX19_05771 at 494.672 kb on + strand, within MPMX19_05771 at 494.672 kb on + strand, within MPMX19_05771 at 494.672 kb on + strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.673 kb on - strand, within MPMX19_05771 at 494.674 kb on + strand, within MPMX19_05771 at 494.675 kb on - strand, within MPMX19_05771 at 494.783 kb on + strand, within MPMX19_05771 at 494.784 kb on - strand, within MPMX19_05771 at 494.784 kb on - strand, within MPMX19_05771 at 494.784 kb on - strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.801 kb on + strand, within MPMX19_05771 at 494.802 kb on - strand, within MPMX19_05771 at 494.802 kb on - strand, within MPMX19_05771 at 494.802 kb on - strand, within MPMX19_05771 at 494.802 kb on - strand, within MPMX19_05771 at 494.802 kb on - strand, within MPMX19_05771 at 494.802 kb on - strand, within MPMX19_05771 at 494.827 kb on + strand at 494.827 kb on + strand at 494.827 kb on + strand at 494.827 kb on + strand at 494.827 kb on + strand at 494.827 kb on + strand at 494.828 kb on - strand at 494.828 kb on - strand at 494.828 kb on - strand at 494.828 kb on - strand at 494.828 kb on - strand at 494.866 kb on + strand at 494.867 kb on - strand at 495.010 kb on + strand, within MPMX19_05772 at 495.010 kb on + strand, within MPMX19_05772 at 495.010 kb on + strand, within MPMX19_05772 at 495.010 kb on + strand, within MPMX19_05772 at 495.010 kb on + strand, within MPMX19_05772 at 495.010 kb on + strand, within MPMX19_05772 at 495.011 kb on - strand, within MPMX19_05772 at 495.011 kb on - strand, within MPMX19_05772 at 495.011 kb on - strand, within MPMX19_05772 at 495.011 kb on - strand, within MPMX19_05772 at 495.011 kb on - strand, within MPMX19_05772 at 495.172 kb on + strand, within MPMX19_05772 at 495.172 kb on + strand, within MPMX19_05772 at 495.172 kb on + strand, within MPMX19_05772 at 495.172 kb on + strand, within MPMX19_05772 at 495.173 kb on - strand, within MPMX19_05772 at 495.173 kb on - strand, within MPMX19_05772 at 495.244 kb on + strand, within MPMX19_05772 at 495.244 kb on + strand, within MPMX19_05772 at 495.244 kb on + strand, within MPMX19_05772 at 495.245 kb on - strand, within MPMX19_05772 at 495.245 kb on - strand, within MPMX19_05772 at 495.245 kb on - strand, within MPMX19_05772 at 495.343 kb on + strand, within MPMX19_05772 at 495.343 kb on + strand, within MPMX19_05772 at 495.344 kb on - strand, within MPMX19_05772 at 495.344 kb on - strand, within MPMX19_05772
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 492,529 + MPMX19_05769 0.15 -0.6 492,529 + MPMX19_05769 0.15 -0.2 492,529 + MPMX19_05769 0.15 +0.6 492,529 + MPMX19_05769 0.15 -1.0 492,529 + MPMX19_05769 0.15 -0.7 492,529 + MPMX19_05769 0.15 -1.4 492,529 + MPMX19_05769 0.15 -0.4 492,529 + MPMX19_05769 0.15 -1.7 492,529 + MPMX19_05769 0.15 -0.6 492,529 + MPMX19_05769 0.15 -0.0 492,529 + MPMX19_05769 0.15 -1.0 492,529 + MPMX19_05769 0.15 -2.1 492,530 - MPMX19_05769 0.16 -0.6 492,530 - MPMX19_05769 0.16 -1.6 492,530 - MPMX19_05769 0.16 -0.1 492,530 - MPMX19_05769 0.16 -1.4 492,530 - MPMX19_05769 0.16 -0.9 492,530 - MPMX19_05769 0.16 -0.1 492,530 - MPMX19_05769 0.16 -0.4 492,530 - MPMX19_05769 0.16 -1.3 492,530 - MPMX19_05769 0.16 -0.3 492,530 - MPMX19_05769 0.16 -0.6 492,530 - MPMX19_05769 0.16 +1.6 492,530 - MPMX19_05769 0.16 -1.4 492,973 + MPMX19_05769 0.90 -1.6 492,973 + MPMX19_05769 0.90 -1.9 492,973 + MPMX19_05769 0.90 +0.7 492,973 + MPMX19_05769 0.90 -0.8 492,973 + MPMX19_05769 0.90 +0.0 492,973 + MPMX19_05769 0.90 -1.6 492,973 + MPMX19_05769 0.90 -1.0 492,973 + MPMX19_05769 0.90 -0.4 492,973 + MPMX19_05769 0.90 -1.4 492,973 + MPMX19_05769 0.90 +0.2 492,973 + MPMX19_05769 0.90 -0.7 492,973 + MPMX19_05769 0.90 +0.4 492,973 + MPMX19_05769 0.90 -0.0 492,973 + MPMX19_05769 0.90 -0.9 492,973 + MPMX19_05769 0.90 -0.3 492,973 + MPMX19_05769 0.90 -0.6 492,973 + MPMX19_05769 0.90 -0.0 492,974 - MPMX19_05769 0.90 -1.8 492,974 - MPMX19_05769 0.90 -0.3 492,974 - MPMX19_05769 0.90 -0.8 492,974 - MPMX19_05769 0.90 +0.7 492,974 - MPMX19_05769 0.90 -0.3 492,974 - MPMX19_05769 0.90 +0.7 492,974 - MPMX19_05769 0.90 +0.6 492,974 - MPMX19_05769 0.90 -0.0 492,974 - MPMX19_05769 0.90 -0.8 492,974 - MPMX19_05769 0.90 -0.1 492,974 - MPMX19_05769 0.90 -0.5 492,974 - MPMX19_05769 0.90 -0.4 492,974 - MPMX19_05769 0.90 -1.7 493,226 + +0.7 493,227 - +0.3 493,452 + -1.0 493,509 + -0.1 493,509 + +0.1 493,509 + +0.4 493,509 + +0.9 493,509 + -0.4 493,509 + +0.0 493,509 + -0.6 493,509 + -1.1 493,509 + -0.8 493,509 + -2.4 493,509 + -0.9 493,509 + +0.6 493,509 + -1.4 493,509 + +0.1 493,510 - +0.1 493,510 - +1.6 493,510 - -0.2 493,510 - +0.3 493,510 - -1.2 493,510 - -1.1 493,510 - -0.3 493,510 - -1.9 493,510 - -0.4 493,510 - -0.9 493,510 - +0.3 493,510 - -0.4 493,510 - +0.6 493,812 + MPMX19_05770 0.30 +0.2 493,812 + MPMX19_05770 0.30 +0.7 493,812 + MPMX19_05770 0.30 -1.2 493,812 + MPMX19_05770 0.30 +0.7 493,812 + MPMX19_05770 0.30 -1.1 493,812 + MPMX19_05770 0.30 -0.1 493,813 - MPMX19_05770 0.30 +0.1 493,813 - MPMX19_05770 0.30 -0.6 493,813 - MPMX19_05770 0.30 +0.2 493,813 - MPMX19_05770 0.30 -0.0 493,813 - MPMX19_05770 0.30 -1.0 493,813 - MPMX19_05770 0.30 -0.9 493,813 - MPMX19_05770 0.30 +0.9 493,813 - MPMX19_05770 0.30 +0.4 493,813 - MPMX19_05770 0.30 +1.1 493,818 + MPMX19_05770 0.31 +0.8 493,818 + MPMX19_05770 0.31 +1.2 493,819 - MPMX19_05770 0.31 -0.9 493,819 - MPMX19_05770 0.31 -1.3 493,819 - MPMX19_05770 0.31 -0.8 493,890 + MPMX19_05770 0.38 +1.3 493,890 + MPMX19_05770 0.38 +0.6 493,890 + MPMX19_05770 0.38 +0.4 493,891 - MPMX19_05770 0.38 -0.7 493,908 + MPMX19_05770 0.40 -0.0 493,908 + MPMX19_05770 0.40 -1.6 493,908 + MPMX19_05770 0.40 +0.6 493,909 - MPMX19_05770 0.40 -1.8 494,001 + MPMX19_05770 0.49 -0.3 494,001 + MPMX19_05770 0.49 +0.1 494,001 + MPMX19_05770 0.49 -0.1 494,001 + MPMX19_05770 0.49 +0.4 494,001 + MPMX19_05770 0.49 +0.8 494,001 + MPMX19_05770 0.49 -1.3 494,002 - MPMX19_05770 0.49 +0.8 494,010 + MPMX19_05770 0.50 +0.6 494,010 + MPMX19_05770 0.50 +0.1 494,010 + MPMX19_05770 0.50 -0.0 494,010 + MPMX19_05770 0.50 -1.6 494,010 + MPMX19_05770 0.50 -0.6 494,010 + MPMX19_05770 0.50 -1.3 494,011 - MPMX19_05770 0.50 -0.4 494,011 - MPMX19_05770 0.50 +0.4 494,011 - MPMX19_05770 0.50 -1.9 494,011 - MPMX19_05770 0.50 -0.8 494,011 - MPMX19_05770 0.50 +0.9 494,011 - MPMX19_05770 0.50 -0.7 494,011 - MPMX19_05770 0.50 +0.7 494,011 - MPMX19_05770 0.50 -0.3 494,011 - MPMX19_05770 0.50 -0.0 494,067 + MPMX19_05770 0.55 -1.3 494,067 + MPMX19_05770 0.55 +0.2 494,067 + MPMX19_05770 0.55 -0.9 494,068 - MPMX19_05770 0.55 -1.0 494,340 + MPMX19_05770 0.82 -1.8 494,341 - MPMX19_05770 0.82 +0.1 494,341 - MPMX19_05770 0.82 +1.2 494,341 - MPMX19_05770 0.82 +0.3 494,341 - MPMX19_05770 0.82 -0.2 494,545 + +0.7 494,545 + +0.8 494,545 + -0.9 494,554 + -0.3 494,554 + +0.7 494,555 - -0.5 494,555 - +0.1 494,672 + MPMX19_05771 0.44 -0.0 494,672 + MPMX19_05771 0.44 -0.6 494,672 + MPMX19_05771 0.44 -0.2 494,672 + MPMX19_05771 0.44 -0.4 494,672 + MPMX19_05771 0.44 -0.3 494,672 + MPMX19_05771 0.44 +0.3 494,672 + MPMX19_05771 0.44 -0.0 494,673 - MPMX19_05771 0.44 +0.7 494,673 - MPMX19_05771 0.44 +1.4 494,673 - MPMX19_05771 0.44 -1.6 494,673 - MPMX19_05771 0.44 +0.3 494,673 - MPMX19_05771 0.44 -0.4 494,673 - MPMX19_05771 0.44 +0.6 494,673 - MPMX19_05771 0.44 +0.1 494,673 - MPMX19_05771 0.44 +0.4 494,673 - MPMX19_05771 0.44 +1.2 494,673 - MPMX19_05771 0.44 -1.9 494,674 + MPMX19_05771 0.44 +0.7 494,675 - MPMX19_05771 0.45 -2.9 494,783 + MPMX19_05771 0.82 -1.4 494,784 - MPMX19_05771 0.83 +1.6 494,784 - MPMX19_05771 0.83 +0.2 494,784 - MPMX19_05771 0.83 -0.6 494,801 + MPMX19_05771 0.89 +1.0 494,801 + MPMX19_05771 0.89 +0.9 494,801 + MPMX19_05771 0.89 -1.3 494,801 + MPMX19_05771 0.89 +0.6 494,801 + MPMX19_05771 0.89 -0.4 494,801 + MPMX19_05771 0.89 +0.1 494,801 + MPMX19_05771 0.89 +0.0 494,801 + MPMX19_05771 0.89 -0.8 494,801 + MPMX19_05771 0.89 +0.3 494,801 + MPMX19_05771 0.89 +1.1 494,801 + MPMX19_05771 0.89 -1.0 494,801 + MPMX19_05771 0.89 -0.3 494,801 + MPMX19_05771 0.89 +0.6 494,801 + MPMX19_05771 0.89 +1.3 494,801 + MPMX19_05771 0.89 +0.3 494,802 - MPMX19_05771 0.89 -0.0 494,802 - MPMX19_05771 0.89 -1.0 494,802 - MPMX19_05771 0.89 -0.8 494,802 - MPMX19_05771 0.89 -0.2 494,802 - MPMX19_05771 0.89 -0.5 494,802 - MPMX19_05771 0.89 +0.3 494,827 + +0.6 494,827 + -0.4 494,827 + +0.0 494,827 + +0.1 494,827 + -0.4 494,827 + -0.6 494,828 - -1.3 494,828 - +0.1 494,828 - -1.8 494,828 - +0.6 494,828 - -0.4 494,866 + -1.0 494,867 - -0.2 495,010 + MPMX19_05772 0.23 +1.1 495,010 + MPMX19_05772 0.23 +0.1 495,010 + MPMX19_05772 0.23 -1.3 495,010 + MPMX19_05772 0.23 -0.7 495,010 + MPMX19_05772 0.23 +1.1 495,010 + MPMX19_05772 0.23 -0.8 495,011 - MPMX19_05772 0.23 +0.7 495,011 - MPMX19_05772 0.23 -0.0 495,011 - MPMX19_05772 0.23 -0.0 495,011 - MPMX19_05772 0.23 +0.6 495,011 - MPMX19_05772 0.23 -0.7 495,172 + MPMX19_05772 0.44 -1.3 495,172 + MPMX19_05772 0.44 +0.2 495,172 + MPMX19_05772 0.44 -0.0 495,172 + MPMX19_05772 0.44 +0.1 495,173 - MPMX19_05772 0.44 -0.0 495,173 - MPMX19_05772 0.44 +0.0 495,244 + MPMX19_05772 0.54 -0.9 495,244 + MPMX19_05772 0.54 -0.2 495,244 + MPMX19_05772 0.54 -0.6 495,245 - MPMX19_05772 0.54 -1.0 495,245 - MPMX19_05772 0.54 -0.0 495,245 - MPMX19_05772 0.54 -0.5 495,343 + MPMX19_05772 0.67 -0.2 495,343 + MPMX19_05772 0.67 -1.4 495,344 - MPMX19_05772 0.67 +0.3 495,344 - MPMX19_05772 0.67 +0.4
Or see this region's nucleotide sequence