Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04288

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
646,578	-		MPMX19_04287	0.50	-1.5
646,578	-		MPMX19_04287	0.50	-1.1
646,688	+		MPMX19_04287	0.57	-0.2
646,688	+		MPMX19_04287	0.57	-0.2
646,688	+		MPMX19_04287	0.57	-1.0
646,688	+		MPMX19_04287	0.57	-0.4
646,688	+		MPMX19_04287	0.57	+0.3
646,689	-		MPMX19_04287	0.57	+0.1
646,689	-		MPMX19_04287	0.57	-0.7
646,689	-		MPMX19_04287	0.57	-1.2
646,689	-		MPMX19_04287	0.57	-0.2
646,689	-		MPMX19_04287	0.57	-1.5
646,689	-		MPMX19_04287	0.57	-1.2
646,828	+		MPMX19_04287	0.66	+0.1
646,828	+		MPMX19_04287	0.66	-0.2
646,828	-		MPMX19_04287	0.66	-0.5
647,171	+		MPMX19_04287	0.88	+0.6
647,171	+		MPMX19_04287	0.88	-0.6
647,171	+		MPMX19_04287	0.88	+0.6
647,171	+		MPMX19_04287	0.88	+1.4
647,171	+		MPMX19_04287	0.88	+0.8
647,171	+		MPMX19_04287	0.88	-0.9
647,171	+		MPMX19_04287	0.88	+0.7
647,171	+		MPMX19_04287	0.88	-1.0
647,171	+		MPMX19_04287	0.88	+0.4
647,171	+		MPMX19_04287	0.88	-1.2
647,171	+		MPMX19_04287	0.88	+1.3
647,171	+		MPMX19_04287	0.88	+0.6
647,171	+		MPMX19_04287	0.88	-0.3
647,172	-		MPMX19_04287	0.88	+1.8
647,172	-		MPMX19_04287	0.88	-0.4
647,172	-		MPMX19_04287	0.88	-0.2
647,172	-		MPMX19_04287	0.88	+1.1
647,172	-		MPMX19_04287	0.88	+0.6
647,172	-		MPMX19_04287	0.88	+0.0
647,441	+				-0.2
647,441	+				+0.0
647,441	+				+0.0
647,441	+				+0.6
647,441	+				+0.5
647,441	+				-0.5
647,441	+				-0.3
647,441	+				+0.8
647,442	-				-0.7
647,442	-				-1.4
647,442	-				+0.1
647,442	-				+0.9
647,442	-				-0.3
647,442	-				-0.6
647,442	-				+0.0
647,442	-				-1.0
647,442	-				-2.2
647,442	-				+0.0
647,442	-				-0.2
647,442	-				+0.0
647,455	+				-0.2
647,455	+				-0.5
647,455	+				-2.1
647,455	+				-0.6
647,456	-				-0.4
647,520	+				-0.2
647,520	+				+1.9
647,520	+				+0.9
647,521	-				-0.5
647,521	-				-0.2
647,521	-				-1.0
647,521	-				-0.6
647,707	+		MPMX19_04288	0.17	-0.8
647,707	+		MPMX19_04288	0.17	-0.7
647,707	+		MPMX19_04288	0.17	-0.9
647,707	+		MPMX19_04288	0.17	-0.4
647,708	-		MPMX19_04288	0.17	-0.1
647,708	-		MPMX19_04288	0.17	-2.1
647,708	-		MPMX19_04288	0.17	+1.0
647,708	-		MPMX19_04288	0.17	-0.4
647,783	-		MPMX19_04288	0.24	-0.5
647,883	+		MPMX19_04288	0.33	+0.6
647,883	+		MPMX19_04288	0.33	+0.2
647,883	+		MPMX19_04288	0.33	-1.7
647,883	+		MPMX19_04288	0.33	+0.0
647,883	+		MPMX19_04288	0.33	+1.0
647,883	+		MPMX19_04288	0.33	-1.2
647,883	+		MPMX19_04288	0.33	-0.1
647,883	+		MPMX19_04288	0.33	-0.5
647,883	+		MPMX19_04288	0.33	+0.3
647,883	+		MPMX19_04288	0.33	-0.1
647,883	+		MPMX19_04288	0.33	+0.8
647,883	+		MPMX19_04288	0.33	-2.1
647,883	+		MPMX19_04288	0.33	+1.3
647,883	+		MPMX19_04288	0.33	+0.6
647,883	+		MPMX19_04288	0.33	-2.4
647,883	+		MPMX19_04288	0.33	-1.5
647,883	+		MPMX19_04288	0.33	+0.3
647,883	+		MPMX19_04288	0.33	-1.0
647,883	+		MPMX19_04288	0.33	-1.5
647,883	+		MPMX19_04288	0.33	-1.0
647,883	+		MPMX19_04288	0.33	+2.2
647,883	+		MPMX19_04288	0.33	-0.2
647,883	+		MPMX19_04288	0.33	+0.5
647,883	+		MPMX19_04288	0.33	-1.0
647,883	+		MPMX19_04288	0.33	-0.7
647,883	+		MPMX19_04288	0.33	+0.2
647,883	+		MPMX19_04288	0.33	-0.8
647,884	-		MPMX19_04288	0.33	-0.5
647,884	-		MPMX19_04288	0.33	-1.7
647,884	-		MPMX19_04288	0.33	-0.2
647,884	-		MPMX19_04288	0.33	+0.6
647,884	-		MPMX19_04288	0.33	-0.6
647,884	-		MPMX19_04288	0.33	-2.2
647,884	-		MPMX19_04288	0.33	+1.2
647,884	-		MPMX19_04288	0.33	-2.1
647,884	-		MPMX19_04288	0.33	+0.0
647,884	-		MPMX19_04288	0.33	+0.8
647,884	-		MPMX19_04288	0.33	-1.2
647,884	-		MPMX19_04288	0.33	+1.9
647,884	-		MPMX19_04288	0.33	-1.2
647,884	-		MPMX19_04288	0.33	-0.1
647,884	-		MPMX19_04288	0.33	-0.4
647,884	-		MPMX19_04288	0.33	-0.9
647,884	-		MPMX19_04288	0.33	+0.3
647,884	-		MPMX19_04288	0.33	-0.8
647,884	-		MPMX19_04288	0.33	-1.4
647,884	-		MPMX19_04288	0.33	-0.2
647,934	+		MPMX19_04288	0.37	+0.4
647,934	+		MPMX19_04288	0.37	+0.0
647,934	+		MPMX19_04288	0.37	+0.3
647,934	+		MPMX19_04288	0.37	+0.8
647,934	+		MPMX19_04288	0.37	-0.3
647,934	+		MPMX19_04288	0.37	+0.2
647,934	+		MPMX19_04288	0.37	-0.2
647,934	+		MPMX19_04288	0.37	-1.5
647,934	+		MPMX19_04288	0.37	+0.5
647,934	+		MPMX19_04288	0.37	-1.1
647,935	-		MPMX19_04288	0.37	-1.7
647,935	-		MPMX19_04288	0.37	-0.7
648,459	+		MPMX19_04288	0.85	-1.2
648,459	+		MPMX19_04288	0.85	-1.1
648,459	+		MPMX19_04288	0.85	-0.6
648,459	+		MPMX19_04288	0.85	+0.5
648,459	+		MPMX19_04288	0.85	+0.0
648,459	+		MPMX19_04288	0.85	-0.8
648,459	+		MPMX19_04288	0.85	-0.1
648,459	+		MPMX19_04288	0.85	-0.7
648,459	+		MPMX19_04288	0.85	+0.3
648,459	+		MPMX19_04288	0.85	-0.2
648,459	+		MPMX19_04288	0.85	-0.1
648,459	+		MPMX19_04288	0.85	-2.3
648,459	+		MPMX19_04288	0.85	-0.4
648,460	-		MPMX19_04288	0.85	-0.5
648,460	-		MPMX19_04288	0.85	-0.4
648,460	-		MPMX19_04288	0.85	-1.3
648,460	-		MPMX19_04288	0.85	+0.0
648,460	-		MPMX19_04288	0.85	+0.9
648,460	-		MPMX19_04288	0.85	+0.4
648,460	-		MPMX19_04288	0.85	+0.1
648,460	-		MPMX19_04288	0.85	-0.6
648,504	+		MPMX19_04288	0.89	-0.4
648,504	+		MPMX19_04288	0.89	-0.3
648,504	+		MPMX19_04288	0.89	-0.1
648,504	+		MPMX19_04288	0.89	+1.6
648,504	+		MPMX19_04288	0.89	-2.2
648,504	+		MPMX19_04288	0.89	-0.4
648,504	+		MPMX19_04288	0.89	+1.0
648,504	+		MPMX19_04288	0.89	+1.0
648,504	+		MPMX19_04288	0.89	-1.1
648,504	+		MPMX19_04288	0.89	+0.7
648,504	+		MPMX19_04288	0.89	+0.2
648,504	+		MPMX19_04288	0.89	-2.0
648,504	+		MPMX19_04288	0.89	+0.0
648,504	+		MPMX19_04288	0.89	-0.3
648,504	+		MPMX19_04288	0.89	+0.2
648,504	+		MPMX19_04288	0.89	-1.5
648,504	+		MPMX19_04288	0.89	+0.6
648,504	+		MPMX19_04288	0.89	+0.5
648,505	-		MPMX19_04288	0.89	+0.9
648,505	-		MPMX19_04288	0.89	-0.4
648,505	-		MPMX19_04288	0.89	-0.2
648,505	-		MPMX19_04288	0.89	+0.6
648,505	-		MPMX19_04288	0.89	-1.7
648,505	-		MPMX19_04288	0.89	-0.5
648,505	-		MPMX19_04288	0.89	+1.1
648,505	-		MPMX19_04288	0.89	-0.6
648,505	-		MPMX19_04288	0.89	+0.4
648,505	-		MPMX19_04288	0.89	-1.0
648,505	-		MPMX19_04288	0.89	-0.5
648,505	-		MPMX19_04288	0.89	-0.7
648,505	-		MPMX19_04288	0.89	-0.6
648,505	-		MPMX19_04288	0.89	+0.2
648,505	-		MPMX19_04288	0.89	+1.0
648,635	+				+0.6
648,636	-				+0.4
648,636	-				-1.0
648,722	+				-1.1
648,750	+				-0.4
648,750	+				-0.1
648,750	+				-0.3
648,750	+				-1.6
648,750	+				-0.6
648,750	+				-0.4
648,751	-				-1.7
648,751	-				+0.0
648,751	-				+0.7
648,751	-				-0.9
648,751	-				-2.2
648,751	-				+0.2
648,751	-				+0.1
648,751	-				+0.4
648,780	+				+0.0
648,831	+				-1.2
648,831	+				-0.9
648,832	-				-2.1
648,832	-				-1.4
648,956	+		MPMX19_04289	0.14	-0.5
648,956	+		MPMX19_04289	0.14	+1.1
648,956	+		MPMX19_04289	0.14	-1.2
648,956	+		MPMX19_04289	0.14	-0.4
648,956	+		MPMX19_04289	0.14	-0.5
648,956	+		MPMX19_04289	0.14	+0.5
648,956	+		MPMX19_04289	0.14	-1.0
648,956	+		MPMX19_04289	0.14	+0.2
648,956	+		MPMX19_04289	0.14	-1.2
648,956	+		MPMX19_04289	0.14	-0.8
648,957	-		MPMX19_04289	0.14	-0.2
648,957	-		MPMX19_04289	0.14	-2.8
648,957	-		MPMX19_04289	0.14	+0.3
649,016	+		MPMX19_04289	0.24	+0.7
649,016	+		MPMX19_04289	0.24	-0.8
649,016	+		MPMX19_04289	0.24	-0.8
649,016	+		MPMX19_04289	0.24	-0.7
649,017	-		MPMX19_04289	0.24	-1.2
649,017	-		MPMX19_04289	0.24	+0.9
649,017	-		MPMX19_04289	0.24	-1.5
649,017	-		MPMX19_04289	0.24	-0.2
649,017	-		MPMX19_04289	0.24	-0.6
649,017	-		MPMX19_04289	0.24	-0.6
649,247	+		MPMX19_04289	0.60	-0.4
649,247	+		MPMX19_04289	0.60	-0.9
649,247	+		MPMX19_04289	0.60	+0.5
649,247	+		MPMX19_04289	0.60	-0.9
649,247	+		MPMX19_04289	0.60	+1.6
649,247	+		MPMX19_04289	0.60	-0.3
649,247	+		MPMX19_04289	0.60	-0.4
649,247	+		MPMX19_04289	0.60	+0.5
649,247	+		MPMX19_04289	0.60	-1.7
649,247	+		MPMX19_04289	0.60	-1.2
649,248	-		MPMX19_04289	0.61	+0.2
649,248	-		MPMX19_04289	0.61	+0.2
649,248	-		MPMX19_04289	0.61	-1.8
649,248	-		MPMX19_04289	0.61	-0.8
649,248	-		MPMX19_04289	0.61	+0.0
649,248	-		MPMX19_04289	0.61	-1.4
649,300	+		MPMX19_04289	0.69	-1.3
649,300	+		MPMX19_04289	0.69	+0.4
649,300	+		MPMX19_04289	0.69	-2.0
649,300	+		MPMX19_04289	0.69	-2.3
649,300	+		MPMX19_04289	0.69	-0.0
649,300	+		MPMX19_04289	0.69	-0.7
649,300	+		MPMX19_04289	0.69	-1.2
649,301	-		MPMX19_04289	0.69	-0.8
649,301	-		MPMX19_04289	0.69	+0.1
649,301	-		MPMX19_04289	0.69	-1.6
649,301	-		MPMX19_04289	0.69	-0.2
649,475	+				+0.3
649,475	+				-2.3
649,514	+				-1.1
649,524	-				-0.1
649,584	+				+1.4
649,585	-				+0.5
649,590	+				+2.2