Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02111

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,209,123	-				+0.3
2,209,136	+				+0.6
2,209,137	-				+0.8
2,209,139	+				+0.6
2,209,139	+				-1.2
2,209,139	+				-1.2
2,209,140	-				-0.2
2,209,140	-				-0.5
2,209,154	+				+0.0
2,209,154	+				-0.7
2,209,160	+				-0.5
2,209,160	+				+0.7
2,209,160	+				-0.7
2,209,161	-				+0.8
2,209,161	-				-0.4
2,209,161	-				+0.6
2,209,213	-				-0.5
2,209,213	-				+0.6
2,209,306	+				+0.8
2,209,339	-				+0.4
2,209,387	+				-0.4
2,209,387	+				+0.0
2,209,387	+				+0.4
2,209,388	-				-0.7
2,209,388	-				-0.4
2,209,388	-				-2.3
2,209,505	+				+1.3
2,209,505	+				-0.5
2,209,786	+		MPMX19_02111	0.17	-1.0
2,209,786	+		MPMX19_02111	0.17	-0.6
2,209,786	+		MPMX19_02111	0.17	-1.8
2,209,786	+		MPMX19_02111	0.17	+0.4
2,209,786	+		MPMX19_02111	0.17	+0.6
2,209,786	+		MPMX19_02111	0.17	+0.4
2,209,786	+		MPMX19_02111	0.17	-0.8
2,209,786	+		MPMX19_02111	0.17	+0.3
2,209,787	-		MPMX19_02111	0.17	+0.4
2,209,787	-		MPMX19_02111	0.17	-0.5
2,209,787	-		MPMX19_02111	0.17	-0.0
2,209,787	-		MPMX19_02111	0.17	-1.3
2,209,787	-		MPMX19_02111	0.17	-0.2
2,209,787	-		MPMX19_02111	0.17	-0.3
2,209,787	-		MPMX19_02111	0.17	+1.0
2,209,933	+		MPMX19_02111	0.24	+0.6
2,209,933	+		MPMX19_02111	0.24	-0.0
2,209,933	+		MPMX19_02111	0.24	+2.0
2,209,933	+		MPMX19_02111	0.24	+0.4
2,209,933	+		MPMX19_02111	0.24	-0.8
2,209,934	-		MPMX19_02111	0.24	-2.0
2,209,934	-		MPMX19_02111	0.24	-0.9
2,209,934	-		MPMX19_02111	0.24	+1.8
2,209,934	-		MPMX19_02111	0.24	-0.6
2,209,934	-		MPMX19_02111	0.24	-0.4
2,209,981	+		MPMX19_02111	0.26	-0.8
2,209,981	+		MPMX19_02111	0.26	-1.7
2,209,981	+		MPMX19_02111	0.26	+1.0
2,209,982	-		MPMX19_02111	0.26	-1.4
2,209,982	-		MPMX19_02111	0.26	+0.0
2,209,982	-		MPMX19_02111	0.26	-1.0
2,209,982	-		MPMX19_02111	0.26	+1.4
2,209,982	-		MPMX19_02111	0.26	+0.6
2,209,982	-		MPMX19_02111	0.26	+0.4
2,209,982	-		MPMX19_02111	0.26	-2.1
2,209,982	-		MPMX19_02111	0.26	-2.9
2,210,032	+		MPMX19_02111	0.28	-1.0
2,210,032	+		MPMX19_02111	0.28	-0.5
2,210,032	+		MPMX19_02111	0.28	-0.6
2,210,032	+		MPMX19_02111	0.28	-0.2
2,210,032	+		MPMX19_02111	0.28	-0.0
2,210,032	+		MPMX19_02111	0.28	-0.1
2,210,032	+		MPMX19_02111	0.28	+0.2
2,210,032	+		MPMX19_02111	0.28	-1.4
2,210,032	+		MPMX19_02111	0.28	-0.5
2,210,032	+		MPMX19_02111	0.28	+0.5
2,210,032	+		MPMX19_02111	0.28	-0.9
2,210,032	+		MPMX19_02111	0.28	+0.7
2,210,033	-		MPMX19_02111	0.28	+0.6
2,210,033	-		MPMX19_02111	0.28	+0.6
2,210,033	-		MPMX19_02111	0.28	-0.1
2,210,033	-		MPMX19_02111	0.28	-1.8
2,210,033	-		MPMX19_02111	0.28	-1.5
2,210,033	-		MPMX19_02111	0.28	+1.1
2,210,033	-		MPMX19_02111	0.28	-0.5
2,210,033	-		MPMX19_02111	0.28	-1.2
2,210,033	-		MPMX19_02111	0.28	-2.4
2,210,033	-		MPMX19_02111	0.28	-0.5
2,210,033	-		MPMX19_02111	0.28	+0.6
2,210,033	-		MPMX19_02111	0.28	-0.9
2,210,033	-		MPMX19_02111	0.28	-0.1
2,210,033	-		MPMX19_02111	0.28	-1.5
2,210,033	-		MPMX19_02111	0.28	-1.0
2,210,033	-		MPMX19_02111	0.28	+0.4
2,210,033	-		MPMX19_02111	0.28	-1.8
2,210,033	-		MPMX19_02111	0.28	-0.7
2,210,033	-		MPMX19_02111	0.28	+1.6
2,210,033	-		MPMX19_02111	0.28	+0.2
2,210,033	-		MPMX19_02111	0.28	+0.4
2,210,033	-		MPMX19_02111	0.28	+0.0
2,210,033	-		MPMX19_02111	0.28	+3.6
2,210,039	+		MPMX19_02111	0.29	-0.2
2,210,039	+		MPMX19_02111	0.29	+0.0
2,210,039	+		MPMX19_02111	0.29	-0.2
2,210,039	+		MPMX19_02111	0.29	+1.4
2,210,039	+		MPMX19_02111	0.29	+0.0
2,210,039	+		MPMX19_02111	0.29	-0.3
2,210,039	+		MPMX19_02111	0.29	-1.7
2,210,039	+		MPMX19_02111	0.29	-1.3
2,210,039	+		MPMX19_02111	0.29	-0.5
2,210,040	-		MPMX19_02111	0.29	+0.3
2,210,040	-		MPMX19_02111	0.29	+0.3
2,210,040	-		MPMX19_02111	0.29	-1.4
2,210,040	-		MPMX19_02111	0.29	-0.4
2,210,040	-		MPMX19_02111	0.29	+0.5
2,210,040	-		MPMX19_02111	0.29	+0.3
2,210,040	-		MPMX19_02111	0.29	+0.0
2,210,040	-		MPMX19_02111	0.29	-0.4
2,210,199	+		MPMX19_02111	0.36	+0.9
2,210,199	+		MPMX19_02111	0.36	+0.0
2,210,199	+		MPMX19_02111	0.36	-2.2
2,210,199	+		MPMX19_02111	0.36	+0.0
2,210,200	-		MPMX19_02111	0.36	-0.6
2,210,200	-		MPMX19_02111	0.36	-0.2
2,210,414	+		MPMX19_02111	0.46	+1.5
2,212,082	+				-0.5
2,212,082	+				-1.1
2,212,082	+				-1.3
2,212,083	-				-1.4
2,212,083	-				-0.6
2,212,083	-				+0.2
2,212,144	+		MPMX19_02112	0.14	-0.2
2,212,144	+		MPMX19_02112	0.14	-1.2
2,212,144	+		MPMX19_02112	0.14	-0.1
2,212,144	+		MPMX19_02112	0.14	+0.6
2,212,144	+		MPMX19_02112	0.14	+1.1
2,212,144	+		MPMX19_02112	0.14	-0.4
2,212,144	+		MPMX19_02112	0.14	-0.5
2,212,144	+		MPMX19_02112	0.14	-1.2
2,212,144	+		MPMX19_02112	0.14	-0.6
2,212,144	+		MPMX19_02112	0.14	-0.5
2,212,145	-		MPMX19_02112	0.14	-0.1
2,212,145	-		MPMX19_02112	0.14	+0.4
2,212,145	-		MPMX19_02112	0.14	+0.3
2,212,145	-		MPMX19_02112	0.14	+0.9
2,212,145	-		MPMX19_02112	0.14	-1.8
2,212,145	-		MPMX19_02112	0.14	-1.4
2,212,145	-		MPMX19_02112	0.14	+0.1
2,212,145	-		MPMX19_02112	0.14	-0.8
2,212,145	-		MPMX19_02112	0.14	+0.5
2,212,145	-		MPMX19_02112	0.14	-1.1
2,212,145	-		MPMX19_02112	0.14	-1.0
2,212,145	-		MPMX19_02112	0.14	-1.6
2,212,145	-		MPMX19_02112	0.14	-0.5
2,212,162	+		MPMX19_02112	0.17	+0.9
2,212,162	+		MPMX19_02112	0.17	-0.7
2,212,162	+		MPMX19_02112	0.17	+0.0
2,212,162	+		MPMX19_02112	0.17	-1.0
2,212,162	+		MPMX19_02112	0.17	-0.6
2,212,162	+		MPMX19_02112	0.17	-0.5
2,212,162	+		MPMX19_02112	0.17	+0.3
2,212,162	+		MPMX19_02112	0.17	+0.2
2,212,162	+		MPMX19_02112	0.17	-0.8
2,212,162	+		MPMX19_02112	0.17	+0.6
2,212,162	+		MPMX19_02112	0.17	+2.0
2,212,163	-		MPMX19_02112	0.17	-0.1
2,212,163	-		MPMX19_02112	0.17	-1.5
2,212,163	-		MPMX19_02112	0.17	-0.5
2,212,163	-		MPMX19_02112	0.17	-0.5
2,212,163	-		MPMX19_02112	0.17	+0.0
2,212,163	-		MPMX19_02112	0.17	-0.1
2,212,276	+		MPMX19_02112	0.35	-1.6
2,212,276	+		MPMX19_02112	0.35	-0.8
2,212,276	+		MPMX19_02112	0.35	-0.5
2,212,276	+		MPMX19_02112	0.35	-0.3
2,212,276	+		MPMX19_02112	0.35	+0.4
2,212,276	+		MPMX19_02112	0.35	-0.7
2,212,276	+		MPMX19_02112	0.35	-0.4
2,212,276	+		MPMX19_02112	0.35	-0.4
2,212,277	-		MPMX19_02112	0.35	-1.3
2,212,277	-		MPMX19_02112	0.35	-0.4
2,212,277	-		MPMX19_02112	0.35	-0.7
2,212,277	-		MPMX19_02112	0.35	+0.9
2,212,277	-		MPMX19_02112	0.35	-0.7
2,212,277	-		MPMX19_02112	0.35	-1.4
2,212,277	-		MPMX19_02112	0.35	-0.7
2,212,567	+		MPMX19_02112	0.81	+0.1
2,212,567	+		MPMX19_02112	0.81	-0.8