Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01699

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,792,263	+		MPMX19_01697	0.74	-1.0
1,792,263	+		MPMX19_01697	0.74	+0.4
1,792,263	+		MPMX19_01697	0.74	-0.4
1,792,263	+		MPMX19_01697	0.74	+0.9
1,792,263	+		MPMX19_01697	0.74	-1.5
1,792,263	+		MPMX19_01697	0.74	+0.4
1,792,263	+		MPMX19_01697	0.74	-1.0
1,792,263	+		MPMX19_01697	0.74	+0.3
1,792,263	+		MPMX19_01697	0.74	-0.2
1,792,264	-		MPMX19_01697	0.74	+0.0
1,792,264	-		MPMX19_01697	0.74	+0.5
1,792,264	-		MPMX19_01697	0.74	+0.7
1,792,264	-		MPMX19_01697	0.74	+0.5
1,792,264	-		MPMX19_01697	0.74	+0.1
1,792,275	+		MPMX19_01697	0.74	-0.3
1,792,275	+		MPMX19_01697	0.74	-0.5
1,792,276	-		MPMX19_01697	0.75	+0.7
1,792,276	-		MPMX19_01697	0.75	-1.0
1,792,276	-		MPMX19_01697	0.75	-0.5
1,792,276	-		MPMX19_01697	0.75	-0.3
1,792,344	+		MPMX19_01697	0.80	-1.2
1,792,344	+		MPMX19_01697	0.80	-0.5
1,792,344	+		MPMX19_01697	0.80	-0.5
1,792,344	+		MPMX19_01697	0.80	+0.1
1,792,344	+		MPMX19_01697	0.80	+0.5
1,792,344	+		MPMX19_01697	0.80	-0.6
1,792,344	+		MPMX19_01697	0.80	-0.7
1,792,344	+		MPMX19_01697	0.80	-2.1
1,792,344	+		MPMX19_01697	0.80	-0.9
1,792,344	+		MPMX19_01697	0.80	+0.7
1,792,344	+		MPMX19_01697	0.80	+1.0
1,792,344	+		MPMX19_01697	0.80	-0.4
1,792,344	+		MPMX19_01697	0.80	-0.6
1,792,344	+		MPMX19_01697	0.80	-0.5
1,792,344	+		MPMX19_01697	0.80	-2.3
1,792,345	-		MPMX19_01697	0.80	-0.9
1,792,345	-		MPMX19_01697	0.80	-0.7
1,792,345	-		MPMX19_01697	0.80	-1.2
1,792,345	-		MPMX19_01697	0.80	-0.5
1,792,345	-		MPMX19_01697	0.80	-0.5
1,792,345	-		MPMX19_01697	0.80	-0.3
1,792,345	-		MPMX19_01697	0.80	-0.4
1,792,345	-		MPMX19_01697	0.80	-0.7
1,792,345	-		MPMX19_01697	0.80	+0.3
1,792,345	-		MPMX19_01697	0.80	-0.6
1,792,345	-		MPMX19_01697	0.80	-1.9
1,792,345	-		MPMX19_01697	0.80	-1.7
1,792,345	-		MPMX19_01697	0.80	+1.8
1,792,345	-		MPMX19_01697	0.80	-1.8
1,792,345	-		MPMX19_01697	0.80	+1.5
1,792,347	+		MPMX19_01697	0.80	-0.6
1,792,347	+		MPMX19_01697	0.80	+0.6
1,792,347	+		MPMX19_01697	0.80	+0.8
1,792,347	+		MPMX19_01697	0.80	-0.8
1,792,347	+		MPMX19_01697	0.80	+0.7
1,792,347	+		MPMX19_01697	0.80	+0.1
1,792,347	+		MPMX19_01697	0.80	-0.5
1,792,347	+		MPMX19_01697	0.80	-2.5
1,792,348	-		MPMX19_01697	0.80	-0.1
1,792,348	-		MPMX19_01697	0.80	-0.8
1,792,348	-		MPMX19_01697	0.80	+0.3
1,792,348	-		MPMX19_01697	0.80	-1.5
1,792,348	-		MPMX19_01697	0.80	-0.4
1,792,348	-		MPMX19_01697	0.80	-0.4
1,792,348	-		MPMX19_01697	0.80	+1.5
1,792,348	-		MPMX19_01697	0.80	-0.5
1,792,427	+		MPMX19_01697	0.86	-1.5
1,792,427	+		MPMX19_01697	0.86	-1.3
1,792,427	+		MPMX19_01697	0.86	-0.5
1,792,427	+		MPMX19_01697	0.86	-1.9
1,792,427	+		MPMX19_01697	0.86	-0.2
1,792,427	+		MPMX19_01697	0.86	+0.5
1,792,427	+		MPMX19_01697	0.86	+1.1
1,792,427	+		MPMX19_01697	0.86	-1.0
1,792,428	-		MPMX19_01697	0.87	-0.8
1,792,428	-		MPMX19_01697	0.87	-0.0
1,792,428	-		MPMX19_01697	0.87	+0.9
1,792,428	-		MPMX19_01697	0.87	-0.7
1,792,428	-		MPMX19_01697	0.87	-1.1
1,792,428	-		MPMX19_01697	0.87	-0.5
1,792,428	-		MPMX19_01697	0.87	-0.8
1,792,606	+				-0.3
1,792,606	+				-0.5
1,792,606	+				-0.3
1,792,606	+				-0.2
1,792,606	+				-0.2
1,792,606	+				-0.0
1,792,606	+				+0.1
1,792,606	+				+0.5
1,792,606	+				-0.5
1,792,606	+				+0.3
1,792,606	+				-1.2
1,792,606	+				-1.2
1,792,606	+				+1.8
1,792,606	+				-1.5
1,792,606	+				-0.5
1,792,606	+				-0.2
1,792,606	+				+1.0
1,792,606	+				+0.7
1,792,606	+				+1.2
1,792,606	+				+0.7
1,792,606	+				+0.7
1,792,606	+				-0.3
1,792,606	+				+0.1
1,792,606	+				-1.0
1,792,606	+				+0.4
1,792,606	+				-0.5
1,792,606	+				+0.4
1,792,606	+				-0.0
1,792,606	+				+0.0
1,792,607	-				-0.4
1,792,607	-				-2.5
1,792,607	-				-0.8
1,792,607	-				-0.1
1,792,607	-				-0.7
1,792,607	-				+0.2
1,792,607	-				+1.1
1,792,607	-				+0.3
1,792,607	-				+1.8
1,792,607	-				-1.6
1,792,607	-				+0.5
1,792,607	-				+1.4
1,792,607	-				-0.8
1,792,607	-				-0.5
1,792,607	-				+0.0
1,792,607	-				+0.0
1,792,607	-				+0.5
1,792,607	-				-0.3
1,792,607	-				-0.5
1,792,607	-				-0.4
1,792,607	-				-1.5
1,792,607	-				+0.8
1,792,607	-				+1.5
1,792,607	-				+0.6
1,792,607	-				+1.9
1,792,607	-				+0.7
1,792,607	-				+0.2
1,792,607	-				+0.4
1,792,607	-				+0.6
1,792,607	-				+0.9
1,792,607	-				-1.2
1,792,607	-				+0.7
1,792,607	-				-1.8
1,792,705	+		MPMX19_01698	0.25	-0.0
1,792,705	+		MPMX19_01698	0.25	-1.0
1,792,705	+		MPMX19_01698	0.25	-0.0
1,792,705	+		MPMX19_01698	0.25	-2.2
1,792,705	+		MPMX19_01698	0.25	-1.0
1,792,705	+		MPMX19_01698	0.25	-0.2
1,792,705	+		MPMX19_01698	0.25	+0.1
1,792,705	+		MPMX19_01698	0.25	-0.4
1,792,705	+		MPMX19_01698	0.25	-1.6
1,792,706	-		MPMX19_01698	0.25	-0.9
1,792,706	-		MPMX19_01698	0.25	-0.0
1,792,789	+		MPMX19_01698	0.43	-2.8
1,792,789	+		MPMX19_01698	0.43	-0.4
1,792,789	+		MPMX19_01698	0.43	-1.0
1,792,789	+		MPMX19_01698	0.43	+0.2
1,792,789	+		MPMX19_01698	0.43	+0.4
1,792,789	+		MPMX19_01698	0.43	+0.8
1,792,789	+		MPMX19_01698	0.43	-1.3
1,792,789	+		MPMX19_01698	0.43	-0.5
1,792,789	+		MPMX19_01698	0.43	-2.2
1,792,789	+		MPMX19_01698	0.43	-0.6
1,792,789	+		MPMX19_01698	0.43	+1.0
1,792,789	+		MPMX19_01698	0.43	+0.1
1,792,789	+		MPMX19_01698	0.43	+0.2
1,792,789	+		MPMX19_01698	0.43	-1.2
1,792,789	+		MPMX19_01698	0.43	-2.0
1,792,789	+		MPMX19_01698	0.43	-0.2
1,792,789	+		MPMX19_01698	0.43	+0.3
1,792,789	+		MPMX19_01698	0.43	-0.2
1,792,789	+		MPMX19_01698	0.43	-0.8
1,792,789	+		MPMX19_01698	0.43	-0.6
1,792,789	+		MPMX19_01698	0.43	+0.1
1,792,789	+		MPMX19_01698	0.43	-0.8
1,792,789	+		MPMX19_01698	0.43	-0.4
1,792,789	+		MPMX19_01698	0.43	-1.0
1,792,789	+		MPMX19_01698	0.43	-1.2
1,792,790	-		MPMX19_01698	0.43	-0.2
1,792,790	-		MPMX19_01698	0.43	-0.9
1,792,790	-		MPMX19_01698	0.43	-0.0
1,792,790	-		MPMX19_01698	0.43	-2.7
1,792,790	-		MPMX19_01698	0.43	-0.9
1,792,790	-		MPMX19_01698	0.43	-1.3
1,792,790	-		MPMX19_01698	0.43	+0.5
1,792,790	-		MPMX19_01698	0.43	-1.2
1,792,790	-		MPMX19_01698	0.43	+0.1
1,792,790	-		MPMX19_01698	0.43	+0.9
1,792,790	-		MPMX19_01698	0.43	+1.5
1,792,790	-		MPMX19_01698	0.43	-1.0
1,792,790	-		MPMX19_01698	0.43	-0.7
1,792,790	-		MPMX19_01698	0.43	+1.1
1,792,790	-		MPMX19_01698	0.43	+0.2
1,792,790	-		MPMX19_01698	0.43	+0.2
1,792,790	-		MPMX19_01698	0.43	-0.0
1,792,790	-		MPMX19_01698	0.43	-0.5
1,792,790	-		MPMX19_01698	0.43	+0.1
1,792,942	+		MPMX19_01698	0.75	-0.6
1,792,942	+		MPMX19_01698	0.75	+0.5
1,792,942	+		MPMX19_01698	0.75	-1.5
1,792,942	+		MPMX19_01698	0.75	-1.6
1,792,942	+		MPMX19_01698	0.75	-1.8
1,792,948	+		MPMX19_01698	0.77	-0.7
1,792,949	-		MPMX19_01698	0.77	+0.5
1,793,038	+				+0.6
1,793,038	+				+0.5
1,793,038	+				-0.7
1,793,038	+				-0.5
1,793,038	+				-0.6
1,793,038	+				-0.0
1,793,038	+				-0.0
1,793,038	+				-1.8
1,793,039	-				+0.2
1,793,039	-				+0.0
1,793,039	-				-3.3
1,793,039	-				+0.1
1,793,039	-				+0.2
1,793,039	-				-0.3
1,793,053	+				-0.6
1,793,053	+				-0.8
1,793,053	+				-0.2
1,793,309	+				+0.5
1,793,309	+				-0.0
1,793,309	+				-1.0
1,793,309	+				+0.1
1,793,309	+				-1.3
1,793,309	+				+2.4
1,793,309	+				+1.0
1,793,309	+				+0.5
1,793,309	+				-1.0
1,793,310	-				-0.2
1,793,310	-				-2.4
1,793,310	-				-0.4
1,793,310	-				+0.0
1,793,310	-				-0.6
1,793,310	-				+0.8
1,793,310	-				+0.1
1,793,310	-				+0.0
1,793,310	-				+1.0
1,793,310	-				-2.5
1,793,310	-				-0.8
1,793,372	+				+1.8
1,793,372	+				-0.5
1,793,372	+				-0.8
1,793,372	+				+0.3
1,793,372	+				-0.0
1,793,372	+				-1.5
1,793,372	+				-0.4
1,793,372	+				-0.7
1,793,372	+				+0.1
1,793,372	+				-0.2
1,793,372	+				-0.6
1,793,373	-				+0.8
1,793,373	-				+0.5
1,793,373	-				-0.6
1,793,390	+				+0.1
1,793,391	-				-0.9
1,793,391	-				-2.4
1,793,391	-				+0.5
1,793,591	+				+1.5
1,793,591	+				-1.0
1,793,591	+				-0.6
1,793,591	+				+1.0
1,793,591	+				-1.6
1,793,591	+				-0.5
1,793,591	+				+0.5
1,793,591	+				-0.9
1,793,591	+				+0.1
1,793,592	-				+0.2
1,793,592	-				+0.4
1,793,592	-				+1.1
1,793,592	-				+0.5
1,793,592	-				-0.2
1,793,592	-				+0.4
1,793,592	-				-0.5
1,793,592	-				+0.4
1,793,592	-				+0.5
1,793,592	-				-3.4
1,793,592	-				-1.1
1,793,592	-				+0.2
1,793,592	-				-0.7
1,793,693	+				+0.2
1,793,723	+				-0.6
1,793,723	+				+0.6
1,793,723	+				+0.2
1,793,723	+				+0.4
1,793,723	+				+0.5
1,793,723	+				-0.3
1,793,723	+				-0.5
1,793,723	+				-1.8
1,793,723	+				-0.0
1,793,724	-				-0.9
1,793,724	-				-0.8
1,793,724	-				-1.6
1,793,724	-				-1.5
1,793,724	-				-1.5
1,793,724	-				-0.6
1,793,724	-				-1.4
1,793,724	-				-1.9
1,793,724	-				-0.0
1,793,789	+				-2.6
1,793,789	+				+1.2
1,793,789	+				-1.2
1,793,789	+				-1.0
1,793,789	+				-1.9
1,793,789	+				+0.4
1,793,789	+				-0.7
1,793,789	+				+0.5
1,793,789	+				-0.0
1,793,789	+				+0.2
1,793,789	+				+0.8
1,793,789	+				+0.0
1,793,789	+				+0.3
1,793,789	+				-2.4
1,793,789	+				-2.4
1,793,789	+				-2.0
1,793,789	+				-1.2
1,793,789	+				+1.2
1,793,789	+				+1.1
1,793,790	-				-1.8
1,793,790	-				+0.5
1,793,790	-				+0.5
1,793,790	-				+0.1
1,793,790	-				+1.1
1,793,790	-				+0.9
1,793,790	-				-0.0
1,793,790	-				-0.9
1,793,790	-				-0.1
1,793,790	-				+1.3
1,793,790	-				-0.8
1,793,790	-				+0.6
1,793,790	-				+0.7
1,793,790	-				+0.4
1,793,790	-				-0.9
1,794,144	+				-0.3
1,794,144	+				-0.8
1,794,145	-				+0.5
1,794,145	-				-0.5