Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01459

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,530,773	+		MPMX19_01458	0.54	+1.2
1,530,774	-		MPMX19_01458	0.54	-1.5
1,530,774	-		MPMX19_01458	0.54	-1.5
1,530,877	+		MPMX19_01458	0.61	+0.8
1,530,877	+		MPMX19_01458	0.61	-0.1
1,530,877	+		MPMX19_01458	0.61	-0.4
1,530,877	+		MPMX19_01458	0.61	+1.7
1,530,877	+		MPMX19_01458	0.61	-0.2
1,530,878	-		MPMX19_01458	0.61	-0.5
1,530,878	-		MPMX19_01458	0.61	-0.8
1,530,878	-		MPMX19_01458	0.61	-0.8
1,530,878	-		MPMX19_01458	0.61	+1.1
1,530,878	-		MPMX19_01458	0.61	+0.7
1,530,991	+		MPMX19_01458	0.69	+1.3
1,530,991	+		MPMX19_01458	0.69	-2.1
1,530,991	+		MPMX19_01458	0.69	+0.6
1,530,992	-		MPMX19_01458	0.69	+0.5
1,530,992	-		MPMX19_01458	0.69	-1.0
1,530,992	-		MPMX19_01458	0.69	-0.1
1,530,992	-		MPMX19_01458	0.69	-1.4
1,530,992	-		MPMX19_01458	0.69	-0.5
1,531,042	+		MPMX19_01458	0.72	-0.7
1,531,042	+		MPMX19_01458	0.72	+0.6
1,531,042	+		MPMX19_01458	0.72	+1.5
1,531,042	+		MPMX19_01458	0.72	+1.0
1,531,042	-		MPMX19_01458	0.72	-1.1
1,531,043	-		MPMX19_01458	0.72	+1.9
1,531,043	-		MPMX19_01458	0.72	+0.1
1,531,043	-		MPMX19_01458	0.72	-0.6
1,531,105	+		MPMX19_01458	0.76	+0.3
1,531,105	+		MPMX19_01458	0.76	+0.3
1,531,105	+		MPMX19_01458	0.76	+0.6
1,531,105	+		MPMX19_01458	0.76	+0.5
1,531,106	-		MPMX19_01458	0.76	+0.1
1,531,106	-		MPMX19_01458	0.76	-1.1
1,531,106	-		MPMX19_01458	0.76	-0.5
1,531,106	-		MPMX19_01458	0.76	-1.9
1,531,106	-		MPMX19_01458	0.76	+0.5
1,531,106	-		MPMX19_01458	0.76	-0.5
1,531,106	-		MPMX19_01458	0.76	-0.2
1,531,108	+		MPMX19_01458	0.77	-0.7
1,531,108	+		MPMX19_01458	0.77	-2.0
1,531,108	+		MPMX19_01458	0.77	-0.7
1,531,108	+		MPMX19_01458	0.77	+0.3
1,531,108	+		MPMX19_01458	0.77	-0.1
1,531,109	-		MPMX19_01458	0.77	-2.3
1,531,109	-		MPMX19_01458	0.77	+0.8
1,531,109	-		MPMX19_01458	0.77	+0.5
1,531,109	-		MPMX19_01458	0.77	+0.5
1,531,109	-		MPMX19_01458	0.77	+0.2
1,531,421	+				-0.0
1,531,421	+				-0.8
1,531,421	+				-0.6
1,531,421	+				+0.2
1,531,421	+				-1.1
1,531,421	+				-0.7
1,531,421	+				-0.7
1,531,421	+				-0.9
1,531,421	+				-1.1
1,531,421	+				+0.7
1,531,421	+				+1.5
1,531,421	+				-1.5
1,531,421	+				-0.9
1,531,421	+				+1.5
1,531,421	+				-1.7
1,531,421	+				+0.6
1,531,421	+				-0.6
1,531,422	-				-0.7
1,531,422	-				+0.5
1,531,422	-				-0.5
1,531,422	-				-0.8
1,531,422	-				-0.8
1,531,422	-				+0.5
1,531,422	-				+0.8
1,531,422	-				+0.2
1,531,422	-				+0.5
1,531,422	-				-1.8
1,531,422	-				-0.8
1,531,422	-				-0.4
1,531,422	-				+0.0
1,531,422	-				-1.8
1,531,422	-				-0.3
1,531,422	-				-1.7
1,531,422	-				-0.1
1,531,422	-				-0.8
1,531,423	+				-2.1
1,531,423	+				-1.3
1,531,423	+				-0.8
1,531,423	+				-0.7
1,531,423	+				+0.2
1,531,423	+				+1.9
1,531,423	+				-0.1
1,531,423	+				-0.7
1,531,423	+				-0.2
1,531,423	+				+0.1
1,531,423	+				-0.7
1,531,423	+				+0.9
1,531,423	+				-0.3
1,531,423	+				+0.5
1,531,423	+				-1.1
1,531,423	+				+0.1
1,531,423	+				+0.7
1,531,423	+				+2.0
1,531,423	+				+0.1
1,531,423	+				+0.5
1,531,423	+				-0.7
1,531,423	+				-1.1
1,531,423	+				-0.2
1,531,424	-				-0.5
1,531,424	-				-0.5
1,531,424	-				+0.8
1,531,424	-				+0.2
1,531,424	-				-1.5
1,531,424	-				-1.0
1,531,424	-				-0.4
1,531,424	-				+0.5
1,531,424	-				-1.1
1,531,424	-				+0.0
1,531,424	-				-0.1
1,531,424	-				-0.1
1,531,424	-				+0.2
1,531,424	-				-2.2
1,531,424	-				-0.2
1,531,424	-				+0.7
1,531,424	-				-1.1
1,531,424	-				-0.5
1,531,424	-				+1.3
1,531,424	-				-1.9
1,531,424	-				-0.8
1,531,716	+				-0.9
1,531,716	+				-0.7
1,531,716	+				+0.1
1,531,716	+				+1.3
1,531,716	+				+0.3
1,531,716	+				-0.8
1,531,716	+				-2.2
1,531,716	+				+1.3
1,531,716	+				-1.0
1,531,716	+				-0.0
1,531,716	+				-0.0
1,531,716	+				-0.4
1,531,716	+				-0.9
1,531,716	+				+0.1
1,531,716	+				+0.3
1,531,716	+				+0.1
1,531,716	+				+0.6
1,531,717	-				-0.9
1,531,717	-				-1.5
1,531,717	-				+0.5
1,531,717	-				-1.3
1,531,717	-				+0.9
1,531,717	-				+0.1
1,531,717	-				+0.3
1,531,717	-				+1.2
1,531,717	-				-0.6
1,531,717	-				-1.8
1,531,717	-				+0.9
1,531,717	-				-0.9
1,531,717	-				-1.3
1,531,717	-				+0.5
1,531,717	-				-0.2
1,531,731	+				+0.5
1,531,731	+				-1.5
1,531,731	+				+2.4
1,531,731	+				-0.5
1,531,731	+				-0.8
1,531,732	-				+0.3
1,531,732	-				+0.8
1,531,732	-				-0.2
1,531,732	-				+0.9
1,531,732	-				-0.7
1,531,732	-				-1.3
1,532,293	+		MPMX19_01459	0.30	-0.7
1,532,293	+		MPMX19_01459	0.30	+0.3
1,532,293	+		MPMX19_01459	0.30	-0.1
1,532,293	+		MPMX19_01459	0.30	-1.1
1,532,294	-		MPMX19_01459	0.30	-1.5
1,532,305	+		MPMX19_01459	0.30	-1.5
1,532,305	+		MPMX19_01459	0.30	-0.3
1,532,305	+		MPMX19_01459	0.30	+1.0
1,532,305	+		MPMX19_01459	0.30	-0.9
1,532,305	+		MPMX19_01459	0.30	+0.5
1,532,305	+		MPMX19_01459	0.30	+1.5
1,532,305	+		MPMX19_01459	0.30	-2.1
1,532,305	+		MPMX19_01459	0.30	-0.8
1,532,305	+		MPMX19_01459	0.30	-0.1
1,532,305	+		MPMX19_01459	0.30	+1.3
1,532,306	-		MPMX19_01459	0.30	-1.8
1,532,306	-		MPMX19_01459	0.30	+0.5
1,532,306	-		MPMX19_01459	0.30	+0.9
1,532,306	-		MPMX19_01459	0.30	+0.7
1,532,306	-		MPMX19_01459	0.30	+1.1
1,532,306	-		MPMX19_01459	0.30	+1.1
1,532,306	-		MPMX19_01459	0.30	-1.5
1,532,401	+		MPMX19_01459	0.35	+0.4
1,532,401	+		MPMX19_01459	0.35	+0.7
1,532,401	+		MPMX19_01459	0.35	-0.3
1,532,401	+		MPMX19_01459	0.35	+0.3
1,532,401	+		MPMX19_01459	0.35	-0.5
1,532,401	+		MPMX19_01459	0.35	+0.5
1,532,401	+		MPMX19_01459	0.35	-0.8
1,532,401	+		MPMX19_01459	0.35	-0.9
1,532,401	+		MPMX19_01459	0.35	-0.1
1,532,401	+		MPMX19_01459	0.35	+0.5
1,532,401	+		MPMX19_01459	0.35	-0.2
1,532,401	+		MPMX19_01459	0.35	-0.8
1,532,401	+		MPMX19_01459	0.35	-1.3
1,532,401	+		MPMX19_01459	0.35	-1.1
1,532,401	+		MPMX19_01459	0.35	+0.8
1,532,401	+		MPMX19_01459	0.35	+0.9
1,532,401	+		MPMX19_01459	0.35	+0.1
1,532,401	+		MPMX19_01459	0.35	-1.0
1,532,401	+		MPMX19_01459	0.35	-1.1
1,532,401	+		MPMX19_01459	0.35	-1.0
1,532,401	+		MPMX19_01459	0.35	+0.2
1,532,401	+		MPMX19_01459	0.35	+0.9
1,532,401	+		MPMX19_01459	0.35	+0.2
1,532,402	-		MPMX19_01459	0.35	+0.2
1,532,402	-		MPMX19_01459	0.35	-0.5
1,532,402	-		MPMX19_01459	0.35	-1.1
1,532,402	-		MPMX19_01459	0.35	-0.1
1,532,402	-		MPMX19_01459	0.35	+0.9
1,532,402	-		MPMX19_01459	0.35	+1.0
1,532,402	-		MPMX19_01459	0.35	-0.3
1,532,402	-		MPMX19_01459	0.35	-0.3
1,532,402	-		MPMX19_01459	0.35	-0.1
1,532,402	-		MPMX19_01459	0.35	+1.5
1,532,413	+		MPMX19_01459	0.36	-0.3
1,532,413	+		MPMX19_01459	0.36	+0.8
1,532,413	+		MPMX19_01459	0.36	+0.4
1,532,413	+		MPMX19_01459	0.36	-0.9
1,532,413	+		MPMX19_01459	0.36	-0.0
1,532,413	+		MPMX19_01459	0.36	-0.3
1,532,413	+		MPMX19_01459	0.36	+0.2
1,532,413	+		MPMX19_01459	0.36	-0.1
1,532,413	+		MPMX19_01459	0.36	-0.6
1,532,414	-		MPMX19_01459	0.36	+0.9
1,532,414	-		MPMX19_01459	0.36	+0.7
1,532,414	-		MPMX19_01459	0.36	-1.5
1,532,414	-		MPMX19_01459	0.36	-1.3
1,532,506	+		MPMX19_01459	0.41	+0.1
1,532,506	+		MPMX19_01459	0.41	+0.5
1,532,506	+		MPMX19_01459	0.41	-2.2
1,532,506	+		MPMX19_01459	0.41	+0.9
1,532,506	+		MPMX19_01459	0.41	+1.1
1,532,506	+		MPMX19_01459	0.41	-1.1
1,532,506	+		MPMX19_01459	0.41	+1.3
1,532,506	+		MPMX19_01459	0.41	+0.4
1,532,506	+		MPMX19_01459	0.41	-0.2
1,532,506	+		MPMX19_01459	0.41	-1.0
1,532,506	+		MPMX19_01459	0.41	-0.2
1,532,506	+		MPMX19_01459	0.41	+1.5
1,532,506	+		MPMX19_01459	0.41	-0.1
1,532,506	+		MPMX19_01459	0.41	-0.9
1,532,506	+		MPMX19_01459	0.41	-1.5
1,532,506	+		MPMX19_01459	0.41	-0.5
1,532,507	-		MPMX19_01459	0.41	+0.8
1,532,507	-		MPMX19_01459	0.41	+0.1
1,532,507	-		MPMX19_01459	0.41	+0.1
1,532,507	-		MPMX19_01459	0.41	+0.4
1,532,507	-		MPMX19_01459	0.41	-0.1
1,532,507	-		MPMX19_01459	0.41	-0.8
1,532,507	-		MPMX19_01459	0.41	+0.5
1,532,507	-		MPMX19_01459	0.41	+0.3
1,532,507	-		MPMX19_01459	0.41	-1.7
1,532,507	-		MPMX19_01459	0.41	-1.3
1,532,507	-		MPMX19_01459	0.41	+0.9
1,532,507	-		MPMX19_01459	0.41	-0.2
1,532,507	-		MPMX19_01459	0.41	-0.3
1,532,507	-		MPMX19_01459	0.41	+0.6
1,532,507	-		MPMX19_01459	0.41	+0.9
1,532,507	-		MPMX19_01459	0.41	-1.5
1,532,686	+		MPMX19_01459	0.50	-1.5
1,532,686	+		MPMX19_01459	0.50	-0.4
1,532,687	-		MPMX19_01459	0.50	+1.1
1,532,687	-		MPMX19_01459	0.50	-0.4
1,532,857	+		MPMX19_01459	0.59	-0.1
1,532,858	-		MPMX19_01459	0.59	-1.3
1,532,858	-		MPMX19_01459	0.59	+1.1
1,532,858	-		MPMX19_01459	0.59	+0.1
1,533,014	+		MPMX19_01459	0.68	+0.1
1,533,014	+		MPMX19_01459	0.68	-1.2
1,533,015	-		MPMX19_01459	0.68	+0.6
1,533,244	+		MPMX19_01459	0.80	-0.1
1,533,244	+		MPMX19_01459	0.80	-1.2
1,533,244	+		MPMX19_01459	0.80	-1.1
1,533,244	+		MPMX19_01459	0.80	+0.8
1,533,244	+		MPMX19_01459	0.80	-2.4
1,533,244	+		MPMX19_01459	0.80	+0.9
1,533,244	+		MPMX19_01459	0.80	+0.8
1,533,244	+		MPMX19_01459	0.80	+1.2
1,533,244	+		MPMX19_01459	0.80	+0.7
1,533,244	+		MPMX19_01459	0.80	+1.5
1,533,244	+		MPMX19_01459	0.80	-0.9
1,533,244	+		MPMX19_01459	0.80	+1.0
1,533,244	+		MPMX19_01459	0.80	-0.1
1,533,244	+		MPMX19_01459	0.80	-0.4
1,533,244	+		MPMX19_01459	0.80	-0.2
1,533,244	+		MPMX19_01459	0.80	-0.1
1,533,244	+		MPMX19_01459	0.80	-0.1
1,533,244	+		MPMX19_01459	0.80	-2.4
1,533,245	-		MPMX19_01459	0.80	+2.1
1,533,245	-		MPMX19_01459	0.80	+0.6
1,533,245	-		MPMX19_01459	0.80	-0.5
1,533,245	-		MPMX19_01459	0.80	-0.5
1,533,245	-		MPMX19_01459	0.80	-0.8
1,533,245	-		MPMX19_01459	0.80	+1.3
1,533,245	-		MPMX19_01459	0.80	+0.8
1,533,245	-		MPMX19_01459	0.80	-0.1
1,533,245	-		MPMX19_01459	0.80	-0.7
1,533,245	-		MPMX19_01459	0.80	-0.7
1,533,245	-		MPMX19_01459	0.80	-0.7
1,533,265	+		MPMX19_01459	0.81	+0.7
1,533,274	+		MPMX19_01459	0.81	-0.9
1,533,274	+		MPMX19_01459	0.81	-0.3
1,533,275	-		MPMX19_01459	0.81	-0.1
1,533,343	-		MPMX19_01459	0.85	-1.0
1,533,490	+				+0.5
1,533,490	+				-0.1
1,533,490	+				+0.2
1,533,490	+				+0.7
1,533,490	+				+0.3
1,533,490	+				-0.3
1,533,490	+				+0.2
1,533,490	+				-0.4
1,533,490	+				-0.1
1,533,490	+				-0.7
1,533,490	+				+0.3
1,533,490	+				-0.4
1,533,490	+				-0.1
1,533,490	+				-0.1
1,533,491	-				+0.1
1,533,491	-				+0.0
1,533,491	-				-1.1
1,533,491	-				+0.0
1,533,491	-				-0.7
1,533,491	-				-0.7
1,533,493	-				+1.6
1,533,595	+				+0.9
1,533,596	-				-1.1
1,533,800	+		MPMX19_01460	0.24	+2.0
1,533,800	+		MPMX19_01460	0.24	-1.1
1,533,801	-		MPMX19_01460	0.25	+0.5
1,533,898	+		MPMX19_01460	0.38	+3.1
1,533,898	+		MPMX19_01460	0.38	-0.4
1,533,899	-		MPMX19_01460	0.38	+0.7
1,533,930	+		MPMX19_01460	0.42	-0.4
1,533,930	+		MPMX19_01460	0.42	+0.5
1,533,930	+		MPMX19_01460	0.42	-0.8
1,533,930	+		MPMX19_01460	0.42	-0.7
1,533,930	+		MPMX19_01460	0.42	+2.1
1,533,930	+		MPMX19_01460	0.42	+0.1
1,533,930	+		MPMX19_01460	0.42	+1.6
1,533,930	+		MPMX19_01460	0.42	-1.3
1,533,930	+		MPMX19_01460	0.42	+1.0
1,533,930	+		MPMX19_01460	0.42	-2.4
1,533,930	+		MPMX19_01460	0.42	+2.5
1,533,930	+		MPMX19_01460	0.42	+0.7
1,533,930	+		MPMX19_01460	0.42	+0.2
1,533,930	+		MPMX19_01460	0.42	-0.2
1,533,930	+		MPMX19_01460	0.42	-2.7
1,533,931	-		MPMX19_01460	0.43	+0.5
1,533,931	-		MPMX19_01460	0.43	+1.2
1,533,931	-		MPMX19_01460	0.43	+0.5
1,533,931	-		MPMX19_01460	0.43	-0.8
1,533,931	-		MPMX19_01460	0.43	+0.9
1,533,931	-		MPMX19_01460	0.43	+0.3
1,533,931	-		MPMX19_01460	0.43	-0.1
1,533,931	-		MPMX19_01460	0.43	-0.8
1,534,148	+		MPMX19_01460	0.73	+1.2
1,534,148	+		MPMX19_01460	0.73	-0.4
1,534,148	+		MPMX19_01460	0.73	-1.7
1,534,148	+		MPMX19_01460	0.73	-0.9
1,534,149	-		MPMX19_01460	0.73	-1.5
1,534,149	-		MPMX19_01460	0.73	+0.0
1,534,305	+				-0.7
1,534,305	+				-0.4
1,534,305	+				-1.8
1,534,305	+				-0.1
1,534,305	+				+0.1
1,534,305	+				-0.8
1,534,305	+				+0.9
1,534,305	+				-0.3
1,534,306	-				+1.5
1,534,306	-				-0.3
1,534,341	+				+1.3
1,534,341	+				+0.9
1,534,341	+				+1.3
1,534,341	+				-0.1
1,534,342	-				-0.1
1,534,624	+		MPMX19_01461	0.39	-0.4
1,534,624	+		MPMX19_01461	0.39	+0.6
1,534,624	+		MPMX19_01461	0.39	-0.2
1,534,624	+		MPMX19_01461	0.39	+0.9
1,534,624	+		MPMX19_01461	0.39	+0.2
1,534,625	-		MPMX19_01461	0.39	+0.7
1,534,625	-		MPMX19_01461	0.39	-0.9
1,534,625	-		MPMX19_01461	0.39	+0.9