Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01363

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,419,464	+		MPMX19_01362	0.50	-0.5
1,419,464	+		MPMX19_01362	0.50	+0.7
1,419,464	+		MPMX19_01362	0.50	-1.7
1,419,464	+		MPMX19_01362	0.50	-0.1
1,419,464	+		MPMX19_01362	0.50	-1.8
1,419,464	+		MPMX19_01362	0.50	+0.3
1,419,464	+		MPMX19_01362	0.50	-1.4
1,419,464	+		MPMX19_01362	0.50	-1.0
1,419,464	+		MPMX19_01362	0.50	-0.5
1,419,464	+		MPMX19_01362	0.50	-0.2
1,419,464	+		MPMX19_01362	0.50	-0.3
1,419,465	-		MPMX19_01362	0.51	-1.2
1,419,465	-		MPMX19_01362	0.51	+0.0
1,419,465	-		MPMX19_01362	0.51	+0.4
1,419,465	-		MPMX19_01362	0.51	+0.5
1,419,465	-		MPMX19_01362	0.51	-0.7
1,419,465	-		MPMX19_01362	0.51	+0.1
1,419,465	-		MPMX19_01362	0.51	+2.0
1,419,465	-		MPMX19_01362	0.51	+0.5
1,419,465	-		MPMX19_01362	0.51	-0.2
1,419,465	-		MPMX19_01362	0.51	-0.3
1,419,465	-		MPMX19_01362	0.51	-0.9
1,419,465	-		MPMX19_01362	0.51	-0.1
1,419,465	-		MPMX19_01362	0.51	-1.1
1,419,465	-		MPMX19_01362	0.51	+1.1
1,419,467	+		MPMX19_01362	0.51	-0.3
1,419,467	+		MPMX19_01362	0.51	+0.5
1,419,467	+		MPMX19_01362	0.51	-1.0
1,419,467	+		MPMX19_01362	0.51	-0.1
1,419,468	-		MPMX19_01362	0.51	+0.3
1,419,468	-		MPMX19_01362	0.51	-1.8
1,419,468	-		MPMX19_01362	0.51	+0.0
1,419,468	-		MPMX19_01362	0.51	+0.3
1,419,468	-		MPMX19_01362	0.51	-2.0
1,419,468	-		MPMX19_01362	0.51	+0.2
1,419,584	+		MPMX19_01362	0.58	+0.5
1,419,584	+		MPMX19_01362	0.58	-0.8
1,419,584	+		MPMX19_01362	0.58	+2.0
1,419,584	+		MPMX19_01362	0.58	-0.6
1,419,584	+		MPMX19_01362	0.58	+1.1
1,419,584	+		MPMX19_01362	0.58	-0.7
1,419,585	-		MPMX19_01362	0.58	-1.1
1,419,585	-		MPMX19_01362	0.58	-1.1
1,419,585	-		MPMX19_01362	0.58	-0.1
1,419,585	-		MPMX19_01362	0.58	+1.0
1,419,585	-		MPMX19_01362	0.58	-0.7
1,419,585	-		MPMX19_01362	0.58	+0.5
1,419,585	-		MPMX19_01362	0.58	-1.1
1,419,738	-		MPMX19_01362	0.68	-0.5
1,419,738	-		MPMX19_01362	0.68	-1.1
1,419,758	+		MPMX19_01362	0.69	+0.7
1,419,758	+		MPMX19_01362	0.69	+0.5
1,419,758	+		MPMX19_01362	0.69	-0.7
1,419,758	+		MPMX19_01362	0.69	-0.5
1,419,758	+		MPMX19_01362	0.69	-1.6
1,419,758	+		MPMX19_01362	0.69	+0.1
1,419,758	+		MPMX19_01362	0.69	-1.5
1,419,758	+		MPMX19_01362	0.69	-2.3
1,419,758	+		MPMX19_01362	0.69	-2.0
1,419,759	-		MPMX19_01362	0.69	+0.3
1,419,759	-		MPMX19_01362	0.69	-0.3
1,419,759	-		MPMX19_01362	0.69	-0.3
1,419,759	-		MPMX19_01362	0.69	+0.5
1,419,759	-		MPMX19_01362	0.69	-0.3
1,419,759	-		MPMX19_01362	0.69	-0.2
1,419,759	-		MPMX19_01362	0.69	-1.2
1,420,305	-				+0.5
1,420,307	+				+0.4
1,420,308	-				+0.7
1,420,322	+				+0.2
1,420,322	+				+2.1
1,420,322	+				+1.5
1,420,322	+				-0.4
1,420,322	+				+1.1
1,420,323	-				-0.3
1,420,323	-				+1.1
1,420,373	+				-1.3
1,420,383	-				-1.1
1,420,433	+		MPMX19_01363	0.15	-1.5
1,420,434	-		MPMX19_01363	0.15	-0.4
1,420,727	+		MPMX19_01363	0.49	-0.5
1,420,727	+		MPMX19_01363	0.49	-0.4
1,420,727	+		MPMX19_01363	0.49	-0.6
1,420,727	+		MPMX19_01363	0.49	-0.7
1,420,728	-		MPMX19_01363	0.49	+0.7
1,420,728	-		MPMX19_01363	0.49	+0.7
1,420,728	-		MPMX19_01363	0.49	+0.0
1,420,728	-		MPMX19_01363	0.49	-0.9
1,420,728	-		MPMX19_01363	0.49	+0.0
1,420,728	-		MPMX19_01363	0.49	-0.6
1,420,728	-		MPMX19_01363	0.49	-0.5
1,420,728	-		MPMX19_01363	0.49	-0.4
1,420,728	-		MPMX19_01363	0.49	-0.5
1,420,728	-		MPMX19_01363	0.49	-0.1
1,420,728	-		MPMX19_01363	0.49	-0.7
1,420,924	+		MPMX19_01363	0.72	+0.4
1,420,924	+		MPMX19_01363	0.72	+0.7
1,420,925	-		MPMX19_01363	0.72	-1.1
1,420,925	-		MPMX19_01363	0.72	+0.9
1,420,997	+		MPMX19_01363	0.81	-1.0
1,420,997	+		MPMX19_01363	0.81	-0.8
1,420,997	+		MPMX19_01363	0.81	-0.3
1,420,997	+		MPMX19_01363	0.81	-0.4
1,420,997	+		MPMX19_01363	0.81	-1.4
1,420,997	+		MPMX19_01363	0.81	+1.2
1,420,997	+		MPMX19_01363	0.81	-0.3
1,420,997	+		MPMX19_01363	0.81	-0.4
1,420,997	+		MPMX19_01363	0.81	-0.6
1,420,997	+		MPMX19_01363	0.81	-0.3
1,420,997	+		MPMX19_01363	0.81	-0.3
1,420,997	+		MPMX19_01363	0.81	-0.7
1,420,997	+		MPMX19_01363	0.81	+0.1
1,420,997	+		MPMX19_01363	0.81	-1.0
1,420,997	+		MPMX19_01363	0.81	-0.5
1,420,997	+		MPMX19_01363	0.81	+0.7
1,420,997	+		MPMX19_01363	0.81	+0.1
1,420,998	-		MPMX19_01363	0.81	-2.3
1,420,998	-		MPMX19_01363	0.81	+1.2
1,420,998	-		MPMX19_01363	0.81	-1.1
1,420,998	-		MPMX19_01363	0.81	-1.0
1,420,998	-		MPMX19_01363	0.81	-0.5
1,420,998	-		MPMX19_01363	0.81	-0.8
1,420,998	-		MPMX19_01363	0.81	-0.3
1,420,998	-		MPMX19_01363	0.81	-1.1
1,420,998	-		MPMX19_01363	0.81	+1.1
1,420,998	-		MPMX19_01363	0.81	-0.1
1,420,998	-		MPMX19_01363	0.81	-0.9
1,420,998	-		MPMX19_01363	0.81	+0.7
1,420,998	-		MPMX19_01363	0.81	-0.4
1,421,115	+				-0.7
1,421,115	+				+0.5
1,421,115	+				-0.3
1,421,116	-				-0.4
1,421,116	-				-1.3
1,421,117	+				-0.1
1,421,117	+				-0.3
1,421,117	+				-0.2
1,421,117	+				-0.7
1,421,117	+				+1.5
1,421,117	+				+0.4
1,421,117	+				-1.9
1,421,117	+				-0.5
1,421,118	-				+0.0
1,421,118	-				-0.5
1,421,118	-				+0.1
1,421,118	-				-0.1
1,421,118	-				-0.9
1,421,118	-				-1.0
1,421,118	-				+0.7
1,421,118	-				+0.3
1,421,118	-				+0.1
1,421,118	-				-1.1
1,421,133	+				+0.1
1,421,147	+				-0.3
1,421,147	+				+0.0
1,421,147	+				+0.1
1,421,147	+				+0.1
1,421,147	+				-0.2
1,421,148	-				+0.2
1,421,148	-				-1.3
1,421,148	-				+0.5
1,421,148	-				-0.7
1,421,148	-				-0.1
1,421,200	+				+0.5
1,421,200	+				-2.2
1,421,200	+				-0.4
1,421,200	+				+1.3
1,421,200	+				-1.7
1,421,200	+				+0.2
1,421,200	+				+0.2
1,421,200	+				-1.9
1,421,200	+				+0.7
1,421,200	+				+0.9
1,421,201	-				+1.2
1,421,201	-				+0.7
1,421,201	-				-0.6
1,421,201	-				-1.8
1,421,201	-				+1.0
1,421,201	-				-0.2
1,421,201	-				+0.1
1,421,201	-				+0.5
1,421,201	-				-2.3
1,421,201	-				-0.4
1,421,201	-				-0.5
1,421,201	-				-0.3
1,421,201	-				-0.7
1,421,201	-				+0.3
1,421,201	-				-0.6
1,421,279	+				-0.2
1,421,279	+				+0.8
1,421,280	-				+0.9
1,421,280	-				-2.2
1,421,280	-				-2.0
1,421,322	+				-0.5
1,421,322	+				-0.1
1,421,322	+				+0.2
1,421,322	+				-0.7
1,421,322	+				+0.5
1,421,322	+				+1.5
1,421,322	+				-0.9
1,421,323	-				+0.7
1,421,323	-				+1.1
1,421,323	-				-0.6
1,421,323	-				-2.2
1,421,323	-				+0.7
1,421,323	-				+0.9
1,421,323	-				-0.2
1,421,323	-				+0.7
1,421,332	+				-1.2
1,421,332	+				-1.7
1,421,332	+				-2.3
1,421,332	+				+0.2
1,421,332	+				+1.5
1,421,332	+				+0.1
1,421,332	+				-0.3
1,421,332	+				+0.6
1,421,332	+				-1.1
1,421,332	+				+0.4
1,421,332	+				-1.5
1,421,332	+				+0.9
1,421,332	+				+1.2
1,421,332	+				+0.9
1,421,333	-				+1.2
1,421,333	-				-0.1
1,421,333	-				+0.7
1,421,333	-				-0.7
1,421,333	-				-0.1
1,421,333	-				-0.1
1,421,333	-				+0.9
1,421,333	-				+0.0
1,421,333	-				-1.1
1,421,333	-				-0.5
1,421,333	-				+0.7
1,421,333	-				-0.4
1,421,333	-				+0.9
1,421,333	-				+1.2
1,421,333	-				-1.6
1,421,333	-				-0.5
1,421,380	+				-1.3
1,421,380	+				-1.7
1,421,380	+				-1.4
1,421,380	+				+0.6
1,421,380	+				+0.0
1,421,381	-				-0.3
1,421,381	-				-0.7
1,421,381	-				+0.2
1,421,381	-				-1.8
1,421,381	-				-0.5
1,421,381	-				+0.9
1,421,393	+				-0.4
1,421,394	-				-0.3
1,421,394	-				+0.3
1,421,608	+				-1.3
1,421,608	+				+1.3
1,421,609	-				+0.4
1,421,609	-				-0.1
1,421,609	-				+0.7
1,421,609	-				-1.6
1,421,609	-				-0.3
1,421,609	-				+0.8
1,421,629	+		MPMX19_01364	0.11	-1.7
1,421,629	+		MPMX19_01364	0.11	-1.1
1,421,629	+		MPMX19_01364	0.11	+0.7
1,421,629	+		MPMX19_01364	0.11	+0.7
1,421,629	+		MPMX19_01364	0.11	+1.0
1,421,630	-		MPMX19_01364	0.11	+0.2
1,421,630	-		MPMX19_01364	0.11	+1.2
1,421,630	-		MPMX19_01364	0.11	-0.3
1,421,686	+		MPMX19_01364	0.16	+0.9
1,421,686	+		MPMX19_01364	0.16	-0.0
1,421,686	+		MPMX19_01364	0.16	-0.1
1,421,686	+		MPMX19_01364	0.16	-0.7
1,421,686	+		MPMX19_01364	0.16	-0.7
1,421,686	+		MPMX19_01364	0.16	-0.4
1,421,686	+		MPMX19_01364	0.16	-0.1
1,421,686	+		MPMX19_01364	0.16	+0.9
1,421,686	+		MPMX19_01364	0.16	-0.4
1,421,686	+		MPMX19_01364	0.16	-1.1
1,421,687	-		MPMX19_01364	0.16	-0.3
1,421,687	-		MPMX19_01364	0.16	+0.3
1,421,687	-		MPMX19_01364	0.16	+0.7
1,421,687	-		MPMX19_01364	0.16	+0.7
1,421,687	-		MPMX19_01364	0.16	+0.8
1,421,687	-		MPMX19_01364	0.16	+0.9
1,421,687	-		MPMX19_01364	0.16	-0.4
1,421,687	-		MPMX19_01364	0.16	+0.3
1,421,740	+		MPMX19_01364	0.20	-1.6
1,421,740	+		MPMX19_01364	0.20	-0.1
1,421,740	+		MPMX19_01364	0.20	-1.9
1,421,740	+		MPMX19_01364	0.20	+1.5
1,421,740	+		MPMX19_01364	0.20	+0.5
1,421,740	+		MPMX19_01364	0.20	-1.0
1,421,740	+		MPMX19_01364	0.20	+0.1
1,421,740	+		MPMX19_01364	0.20	-1.0
1,421,740	+		MPMX19_01364	0.20	-0.8
1,421,740	+		MPMX19_01364	0.20	+0.4
1,421,740	+		MPMX19_01364	0.20	+1.0
1,421,740	+		MPMX19_01364	0.20	+2.5
1,421,740	+		MPMX19_01364	0.20	-1.4
1,421,740	+		MPMX19_01364	0.20	+0.6
1,421,741	-		MPMX19_01364	0.20	-1.3
1,421,741	-		MPMX19_01364	0.20	+1.1
1,421,741	-		MPMX19_01364	0.20	+0.9
1,421,741	-		MPMX19_01364	0.20	+0.0
1,421,741	-		MPMX19_01364	0.20	+0.3
1,421,741	-		MPMX19_01364	0.20	+0.5
1,421,741	-		MPMX19_01364	0.20	-1.2
1,421,741	-		MPMX19_01364	0.20	-0.7
1,421,761	+		MPMX19_01364	0.22	-0.7
1,421,761	+		MPMX19_01364	0.22	+1.8
1,421,761	+		MPMX19_01364	0.22	-1.2
1,421,761	+		MPMX19_01364	0.22	+0.5
1,421,761	+		MPMX19_01364	0.22	-0.3
1,421,761	+		MPMX19_01364	0.22	+0.3
1,421,761	+		MPMX19_01364	0.22	-1.0
1,421,761	+		MPMX19_01364	0.22	-0.4
1,421,761	+		MPMX19_01364	0.22	+1.4
1,421,761	+		MPMX19_01364	0.22	-0.5
1,421,761	+		MPMX19_01364	0.22	-1.3
1,421,761	+		MPMX19_01364	0.22	+0.7
1,421,761	+		MPMX19_01364	0.22	-0.5
1,421,761	+		MPMX19_01364	0.22	+0.3
1,421,761	+		MPMX19_01364	0.22	-0.9
1,421,761	+		MPMX19_01364	0.22	-0.5
1,421,761	+		MPMX19_01364	0.22	+0.8
1,421,761	+		MPMX19_01364	0.22	+0.3
1,421,761	+		MPMX19_01364	0.22	-1.0
1,421,761	+		MPMX19_01364	0.22	-0.4
1,421,761	+		MPMX19_01364	0.22	+0.8
1,421,761	+		MPMX19_01364	0.22	-0.1
1,421,761	+		MPMX19_01364	0.22	-0.7
1,421,762	-		MPMX19_01364	0.22	-0.1
1,421,762	-		MPMX19_01364	0.22	-1.3
1,421,762	-		MPMX19_01364	0.22	+0.5
1,421,762	-		MPMX19_01364	0.22	-1.2
1,421,762	-		MPMX19_01364	0.22	-1.5
1,421,762	-		MPMX19_01364	0.22	+0.0
1,421,762	-		MPMX19_01364	0.22	-0.7
1,421,762	-		MPMX19_01364	0.22	-1.0
1,421,762	-		MPMX19_01364	0.22	-1.3
1,421,762	-		MPMX19_01364	0.22	-0.7
1,421,762	-		MPMX19_01364	0.22	+1.3
1,421,762	-		MPMX19_01364	0.22	-0.5
1,421,762	-		MPMX19_01364	0.22	+0.4
1,421,762	-		MPMX19_01364	0.22	-0.5
1,421,762	-		MPMX19_01364	0.22	+1.0
1,421,762	-		MPMX19_01364	0.22	+0.6
1,421,762	-		MPMX19_01364	0.22	-0.7
1,421,762	-		MPMX19_01364	0.22	+0.3
1,421,762	-		MPMX19_01364	0.22	-0.3
1,421,762	-		MPMX19_01364	0.22	-0.5
1,421,863	+		MPMX19_01364	0.30	+0.1
1,421,863	+		MPMX19_01364	0.30	-2.3
1,421,863	+		MPMX19_01364	0.30	+3.1
1,421,864	-		MPMX19_01364	0.30	+0.7
1,421,864	-		MPMX19_01364	0.30	-1.3
1,421,864	-		MPMX19_01364	0.30	+0.3
1,421,864	-		MPMX19_01364	0.30	-2.9
1,421,886	+		MPMX19_01364	0.32	+1.0
1,421,886	+		MPMX19_01364	0.32	-0.3
1,421,887	-		MPMX19_01364	0.32	-0.0
1,421,893	+		MPMX19_01364	0.33	-0.8
1,422,130	+		MPMX19_01364	0.52	+0.8
1,422,130	+		MPMX19_01364	0.52	+1.1
1,422,130	+		MPMX19_01364	0.52	-1.7
1,422,130	+		MPMX19_01364	0.52	-0.3
1,422,131	-		MPMX19_01364	0.52	+1.4
1,422,131	-		MPMX19_01364	0.52	+0.7
1,422,131	-		MPMX19_01364	0.52	-0.5
1,422,131	-		MPMX19_01364	0.52	+1.1
1,422,131	-		MPMX19_01364	0.52	+0.2
1,422,131	-		MPMX19_01364	0.52	+0.4