Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01026

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,064,889	-				+0.3
1,064,889	-				+0.3
1,064,889	-				+0.1
1,064,889	-				-0.2
1,064,889	-				+0.2
1,064,889	-				+0.3
1,064,906	-				+1.5
1,064,927	-				+0.3
1,064,927	-				-0.7
1,064,927	-				-0.8
1,064,927	-				-0.3
1,064,927	-				+0.5
1,064,927	-				-0.3
1,064,931	-				-1.8
1,064,931	-				-2.0
1,064,931	-				-1.1
1,064,931	-				+0.2
1,064,931	-				+0.6
1,064,931	-				-0.8
1,064,931	-				-0.1
1,064,931	-				-0.8
1,064,931	-				+0.2
1,064,931	-				-0.7
1,064,931	-				+0.9
1,064,931	-				+0.4
1,064,959	-				-0.8
1,064,959	-				-0.4
1,064,959	-				-1.1
1,064,959	-				+0.7
1,064,959	-				+0.5
1,064,959	-				+1.1
1,064,959	-				-0.6
1,064,999	+				-0.3
1,064,999	+				-0.1
1,064,999	+				+0.7
1,064,999	+				-0.5
1,064,999	+				+0.7
1,065,000	-				-1.3
1,065,000	-				-0.4
1,065,000	-				-0.3
1,065,000	-				-0.3
1,065,000	-				-1.1
1,065,000	-				-0.9
1,065,060	+				-0.7
1,065,060	+				-1.1
1,065,060	+				-0.4
1,065,060	+				-1.3
1,065,060	+				-0.6
1,065,060	+				-0.8
1,065,060	+				-1.7
1,065,060	+				-1.5
1,065,060	+				+0.4
1,065,060	+				+0.5
1,065,061	-				+0.6
1,065,061	-				+0.1
1,065,061	-				-1.8
1,065,061	-				+0.3
1,065,061	-				+0.8
1,065,061	-				-1.6
1,065,061	-				+0.5
1,065,061	-				+0.3
1,065,061	-				+0.5
1,065,061	-				+0.9
1,065,061	-				-0.2
1,065,061	-				-1.3
1,065,061	-				-1.0
1,065,061	-				+1.3
1,065,061	-				-0.5
1,065,061	-				-0.1
1,065,061	-				+0.7
1,065,063	+				-0.9
1,065,063	+				+1.1
1,065,063	+				-1.3
1,065,063	+				+0.1
1,065,063	+				-0.3
1,065,063	+				-0.8
1,065,063	+				+0.7
1,065,063	+				+0.3
1,065,063	+				+0.6
1,065,063	+				+0.5
1,065,064	-				+1.2
1,065,064	-				+0.1
1,065,064	-				+0.5
1,065,064	-				+0.1
1,065,064	-				+0.1
1,065,064	-				-0.8
1,065,064	-				+0.8
1,065,064	-				-0.2
1,065,064	-				+0.2
1,065,064	-				+2.0
1,065,064	-				-0.4
1,065,064	-				-0.3
1,065,064	-				-2.2
1,065,064	-				+0.3
1,065,064	-				+2.3
1,065,064	-				-0.7
1,065,064	-				+0.3
1,065,065	+				-0.7
1,065,065	+				-0.7
1,065,065	+				+1.5
1,065,065	+				-0.2
1,065,065	+				+0.1
1,065,065	+				-0.8
1,065,065	+				-1.7
1,065,065	+				-1.0
1,065,065	+				-0.4
1,065,065	+				-0.9
1,065,065	+				+1.1
1,065,065	+				-0.1
1,065,065	+				-0.6
1,065,065	+				-0.7
1,065,065	+				-0.7
1,065,065	+				-2.2
1,065,065	+				-2.1
1,065,065	+				-0.1
1,065,065	+				-0.3
1,065,065	+				-1.1
1,065,065	+				+0.1
1,065,065	+				-0.0
1,065,065	+				+1.0
1,065,065	+				-0.1
1,065,065	+				+0.3
1,065,065	+				+0.3
1,065,065	+				-0.2
1,065,065	+				-0.2
1,065,065	+				+1.1
1,065,065	+				-1.1
1,065,065	+				-0.4
1,065,065	+				-1.1
1,065,065	+				+0.3
1,065,065	+				+0.8
1,065,065	+				-1.0
1,065,065	+				+0.0
1,065,065	+				-0.2
1,065,065	+				+0.6
1,065,065	+				-2.0
1,065,065	+				-0.1
1,065,065	+				-1.0
1,065,065	+				-0.5
1,065,065	+				-1.6
1,065,065	+				-0.0
1,065,065	+				-0.6
1,065,066	-				-0.1
1,065,066	-				+0.1
1,065,066	-				-0.3
1,065,066	-				+0.3
1,065,066	-				-0.2
1,065,066	-				+0.6
1,065,066	-				-0.5
1,065,066	-				+0.0
1,065,066	-				-0.8
1,065,066	-				-1.3
1,065,066	-				-1.1
1,065,066	-				-0.3
1,065,066	-				+0.2
1,065,066	-				-0.1
1,065,066	-				-0.0
1,065,066	-				+0.0
1,065,066	-				-0.4
1,065,066	-				+0.5
1,065,066	-				+0.3
1,065,066	-				+1.1
1,065,066	-				-0.6
1,065,066	-				-1.2
1,065,066	-				+0.4
1,065,066	-				-0.4
1,065,066	-				+0.1
1,065,066	-				-1.5
1,065,066	-				-0.1
1,065,066	-				-0.3
1,065,066	-				+0.0
1,065,066	-				-1.0
1,065,066	-				+0.6
1,065,066	-				-2.7
1,065,066	-				-0.2
1,065,066	-				+0.7
1,065,066	-				-1.4
1,065,066	-				-0.9
1,065,066	-				-0.8
1,065,331	+		MPMX19_01027	0.48	+0.1
1,065,331	+		MPMX19_01027	0.48	+0.8
1,065,331	+		MPMX19_01027	0.48	+0.7
1,065,331	+		MPMX19_01027	0.48	-1.3
1,065,331	+		MPMX19_01027	0.48	-1.2
1,065,331	+		MPMX19_01027	0.48	+0.1
1,065,331	+		MPMX19_01027	0.48	-0.1
1,065,332	-		MPMX19_01027	0.48	+0.3
1,065,332	-		MPMX19_01027	0.48	-0.1
1,065,332	-		MPMX19_01027	0.48	-0.1
1,065,332	-		MPMX19_01027	0.48	+0.3
1,065,332	-		MPMX19_01027	0.48	+0.8
1,065,332	-		MPMX19_01027	0.48	+0.8
1,065,332	-		MPMX19_01027	0.48	-1.2
1,065,332	-		MPMX19_01027	0.48	+0.4
1,065,367	+		MPMX19_01027	0.54	-1.0
1,065,367	+		MPMX19_01027	0.54	+0.6
1,065,367	+		MPMX19_01027	0.54	+0.4
1,065,367	+		MPMX19_01027	0.54	-0.2
1,065,367	+		MPMX19_01027	0.54	+0.3
1,065,367	+		MPMX19_01027	0.54	+0.7
1,065,367	+		MPMX19_01027	0.54	-0.4
1,065,367	+		MPMX19_01027	0.54	+0.1
1,065,367	+		MPMX19_01027	0.54	+0.7
1,065,367	+		MPMX19_01027	0.54	+0.7
1,065,367	+		MPMX19_01027	0.54	-2.7
1,065,367	+		MPMX19_01027	0.54	+1.3
1,065,368	-		MPMX19_01027	0.54	-0.2
1,065,368	-		MPMX19_01027	0.54	-0.1
1,065,368	-		MPMX19_01027	0.54	-1.5
1,065,368	-		MPMX19_01027	0.54	-2.1
1,065,368	-		MPMX19_01027	0.54	+0.1
1,065,368	-		MPMX19_01027	0.54	-1.5
1,065,368	-		MPMX19_01027	0.54	-0.8
1,065,368	-		MPMX19_01027	0.54	-1.4
1,065,368	-		MPMX19_01027	0.54	-0.9
1,065,415	+		MPMX19_01027	0.62	+0.3
1,065,415	+		MPMX19_01027	0.62	+1.0
1,065,415	+		MPMX19_01027	0.62	-1.2
1,065,415	+		MPMX19_01027	0.62	+3.1
1,065,415	+		MPMX19_01027	0.62	+3.5
1,065,415	+		MPMX19_01027	0.62	-0.6
1,065,415	+		MPMX19_01027	0.62	-0.2
1,065,415	+		MPMX19_01027	0.62	+0.4
1,065,415	+		MPMX19_01027	0.62	-0.8
1,065,415	+		MPMX19_01027	0.62	-0.7
1,065,415	+		MPMX19_01027	0.62	-0.7
1,065,415	+		MPMX19_01027	0.62	-1.7
1,065,415	+		MPMX19_01027	0.62	-2.5
1,065,415	+		MPMX19_01027	0.62	-0.9
1,065,415	+		MPMX19_01027	0.62	+1.3
1,065,415	+		MPMX19_01027	0.62	-0.5
1,065,415	+		MPMX19_01027	0.62	+1.3
1,065,415	+		MPMX19_01027	0.62	-0.1
1,065,416	-		MPMX19_01027	0.62	-0.8
1,065,416	-		MPMX19_01027	0.62	-0.9
1,065,416	-		MPMX19_01027	0.62	-0.3
1,065,416	-		MPMX19_01027	0.62	-0.6
1,065,416	-		MPMX19_01027	0.62	+0.5
1,065,416	-		MPMX19_01027	0.62	+0.7
1,065,416	-		MPMX19_01027	0.62	+0.5
1,065,416	-		MPMX19_01027	0.62	+0.0
1,065,416	-		MPMX19_01027	0.62	-0.1
1,065,416	-		MPMX19_01027	0.62	+0.1
1,065,416	-		MPMX19_01027	0.62	-1.0
1,065,416	-		MPMX19_01027	0.62	-0.4
1,065,416	-		MPMX19_01027	0.62	-0.1
1,065,416	-		MPMX19_01027	0.62	-0.1
1,065,416	-		MPMX19_01027	0.62	-1.4
1,065,421	+		MPMX19_01027	0.63	-0.7
1,065,421	+		MPMX19_01027	0.63	-0.7
1,065,421	+		MPMX19_01027	0.63	+0.5
1,065,421	+		MPMX19_01027	0.63	-0.2
1,065,421	+		MPMX19_01027	0.63	+0.8
1,065,421	+		MPMX19_01027	0.63	-0.7
1,065,422	-		MPMX19_01027	0.63	-0.1
1,065,422	-		MPMX19_01027	0.63	-1.3
1,065,422	-		MPMX19_01027	0.63	+0.6
1,065,422	-		MPMX19_01027	0.63	+0.3
1,065,422	-		MPMX19_01027	0.63	+0.7
1,065,469	+		MPMX19_01027	0.71	-1.2
1,065,469	+		MPMX19_01027	0.71	+1.5
1,065,469	+		MPMX19_01027	0.71	-0.2
1,065,469	+		MPMX19_01027	0.71	-0.6
1,065,469	+		MPMX19_01027	0.71	-1.3
1,065,469	+		MPMX19_01027	0.71	-1.4
1,065,469	+		MPMX19_01027	0.71	-0.6
1,065,469	+		MPMX19_01027	0.71	-0.1
1,065,470	-		MPMX19_01027	0.71	-2.1
1,065,470	-		MPMX19_01027	0.71	-0.6
1,065,470	-		MPMX19_01027	0.71	+1.3
1,065,470	-		MPMX19_01027	0.71	-1.0
1,065,470	-		MPMX19_01027	0.71	-0.6
1,065,470	-		MPMX19_01027	0.71	-1.2
1,065,470	-		MPMX19_01027	0.71	-0.5
1,065,583	+		MPMX19_01027	0.90	-0.3
1,065,583	+		MPMX19_01027	0.90	-1.5
1,065,583	+		MPMX19_01027	0.90	+0.4
1,065,583	+		MPMX19_01027	0.90	+0.4
1,065,583	+		MPMX19_01027	0.90	-2.7
1,065,583	+		MPMX19_01027	0.90	-0.7
1,065,583	+		MPMX19_01027	0.90	-1.2
1,065,583	+		MPMX19_01027	0.90	+0.3
1,065,584	-		MPMX19_01027	0.90	-0.9
1,065,584	-		MPMX19_01027	0.90	+0.6
1,065,584	-		MPMX19_01027	0.90	-0.5
1,065,584	-		MPMX19_01027	0.90	+0.2
1,065,584	-		MPMX19_01027	0.90	-0.3
1,065,584	-		MPMX19_01027	0.90	-1.7
1,065,584	-		MPMX19_01027	0.90	-0.2
1,065,584	-		MPMX19_01027	0.90	+0.8
1,065,584	-		MPMX19_01027	0.90	-0.5
1,065,584	-		MPMX19_01027	0.90	-1.2
1,065,635	+				-0.1
1,065,636	-				-0.5
1,065,636	-				-0.1
1,065,636	-				-0.8
1,065,643	+				-0.5
1,065,643	+				-0.2
1,065,643	+				-0.5
1,065,643	+				-0.5
1,065,644	-				-0.7
1,065,644	-				+0.7
1,065,644	-				-0.7
1,065,644	-				-1.1
1,065,664	+				+0.2
1,065,664	+				-0.3
1,065,664	+				-0.1
1,065,664	+				-0.0
1,065,664	+				-1.8
1,065,664	+				-1.1
1,065,664	+				-0.0
1,065,664	+				-0.5
1,065,664	+				-0.1
1,065,664	+				+0.5
1,065,664	+				-1.5
1,065,664	+				-1.3
1,065,664	+				-0.3
1,065,664	+				-0.8
1,065,664	+				+0.1
1,065,664	+				-0.1
1,065,664	+				-2.5
1,065,664	+				-1.4
1,065,665	-				-0.5
1,065,665	-				+0.2
1,065,665	-				-0.0
1,065,665	-				-1.8
1,065,665	-				+1.5
1,065,712	-				-0.8
1,065,727	+				-0.1
1,065,728	-				-0.1
1,065,728	-				+0.5
1,065,728	-				-2.5
1,065,779	+				+0.9
1,065,780	-				+0.3
1,065,780	-				-0.4
1,065,811	+		MPMX19_01028	0.10	+0.5
1,065,823	+		MPMX19_01028	0.12	+0.2
1,065,823	+		MPMX19_01028	0.12	+0.6
1,065,823	+		MPMX19_01028	0.12	+0.8
1,065,823	+		MPMX19_01028	0.12	-0.7
1,065,823	+		MPMX19_01028	0.12	-0.1
1,065,823	+		MPMX19_01028	0.12	+0.1
1,065,824	-		MPMX19_01028	0.12	+1.0
1,065,824	-		MPMX19_01028	0.12	+0.5
1,065,824	-		MPMX19_01028	0.12	-1.6
1,065,824	-		MPMX19_01028	0.12	-0.9
1,065,824	-		MPMX19_01028	0.12	-3.2
1,065,824	-		MPMX19_01028	0.12	-0.5
1,065,860	+		MPMX19_01028	0.16	+1.0
1,065,860	+		MPMX19_01028	0.16	+0.3
1,065,860	+		MPMX19_01028	0.16	+0.1
1,065,861	-		MPMX19_01028	0.16	-0.5
1,065,861	-		MPMX19_01028	0.16	+0.3