Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00704

Experiment: NL-CCM; high oxygen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00703 and MPMX19_00704 are separated by 149 nucleotidesMPMX19_00704 and MPMX19_00705 are separated by 264 nucleotides MPMX19_00703: MPMX19_00703 - Tol-Pal system protein TolB, at 723,658 to 725,010 _00703 MPMX19_00704: MPMX19_00704 - Peptidoglycan-associated lipoprotein, at 725,160 to 725,630 _00704 MPMX19_00705: MPMX19_00705 - Cell division coordinator CpoB, at 725,895 to 726,749 _00705 Position (kb) 725 726Strain fitness (log2 ratio) -2 -1 0 1 2at 725.022 kb on + strandat 725.022 kb on + strandat 725.628 kb on + strandat 725.628 kb on + strandat 725.629 kb on - strandat 725.629 kb on - strandat 725.629 kb on - strandat 725.629 kb on - strandat 725.629 kb on - strandat 725.727 kb on + strandat 725.728 kb on - strandat 725.728 kb on - strandat 725.728 kb on - strandat 725.728 kb on - strandat 725.806 kb on + strandat 725.806 kb on + strandat 725.807 kb on - strandat 725.831 kb on + strandat 725.831 kb on + strandat 725.888 kb on + strandat 725.888 kb on + strandat 725.888 kb on + strandat 726.414 kb on + strand, within MPMX19_00705at 726.414 kb on + strand, within MPMX19_00705at 726.414 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; high oxygen
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725,022 + +0.6
725,022 + -0.7
725,628 + +0.1
725,628 + -1.0
725,629 - +0.7
725,629 - -2.0
725,629 - -0.7
725,629 - +1.5
725,629 - -0.6
725,727 + +0.6
725,728 - -0.7
725,728 - +0.4
725,728 - -0.3
725,728 - -1.1
725,806 + -0.3
725,806 + +2.0
725,807 - +0.9
725,831 + -1.4
725,831 + -0.5
725,888 + +0.1
725,888 + +1.9
725,888 + -1.2
726,414 + MPMX19_00705 0.61 -1.3
726,414 + MPMX19_00705 0.61 -1.8
726,414 + MPMX19_00705 0.61 +1.2
726,507 + MPMX19_00705 0.72 -1.5
726,507 + MPMX19_00705 0.72 -0.8
726,507 + MPMX19_00705 0.72 -0.1
726,507 + MPMX19_00705 0.72 -0.5
726,507 + MPMX19_00705 0.72 -1.5
726,507 + MPMX19_00705 0.72 -1.2
726,507 + MPMX19_00705 0.72 -0.1
726,507 + MPMX19_00705 0.72 +1.5
726,507 + MPMX19_00705 0.72 -0.3
726,510 + MPMX19_00705 0.72 -2.6
726,510 + MPMX19_00705 0.72 +1.1
726,510 + MPMX19_00705 0.72 +0.2
726,510 + MPMX19_00705 0.72 -0.1
726,510 + MPMX19_00705 0.72 -1.3
726,510 + MPMX19_00705 0.72 -0.8
726,510 + MPMX19_00705 0.72 -0.1
726,510 + MPMX19_00705 0.72 -1.1

Or see this region's nucleotide sequence