Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03520 and MPMX19_03521 are separated by 173 nucleotides MPMX19_03521 and MPMX19_03522 are separated by 88 nucleotides
MPMX19_03520: MPMX19_03520 - Hydrogen peroxide-inducible genes activator, at 938,595 to 939,494
_03520
MPMX19_03521: MPMX19_03521 - Glutathione S-transferase GST-4.5, at 939,668 to 940,279
_03521
MPMX19_03522: MPMX19_03522 - Flavohemoprotein, at 940,368 to 942,467
_03522
Position (kb) 939
940
941 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 938.814 kb on + strand, within MPMX19_03520 at 938.814 kb on + strand, within MPMX19_03520 at 938.814 kb on + strand, within MPMX19_03520 at 938.814 kb on + strand, within MPMX19_03520 at 938.815 kb on - strand, within MPMX19_03520 at 938.815 kb on - strand, within MPMX19_03520 at 939.027 kb on + strand, within MPMX19_03520 at 939.027 kb on + strand, within MPMX19_03520 at 939.027 kb on + strand, within MPMX19_03520 at 939.027 kb on + strand, within MPMX19_03520 at 939.027 kb on + strand, within MPMX19_03520 at 939.027 kb on + strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.028 kb on - strand, within MPMX19_03520 at 939.073 kb on - strand, within MPMX19_03520 at 939.073 kb on - strand, within MPMX19_03520 at 939.084 kb on + strand, within MPMX19_03520 at 939.293 kb on + strand, within MPMX19_03520 at 939.293 kb on + strand, within MPMX19_03520 at 939.500 kb on + strand at 939.500 kb on + strand at 939.500 kb on + strand at 939.500 kb on + strand at 939.500 kb on + strand at 939.500 kb on + strand at 939.501 kb on - strand at 939.501 kb on - strand at 939.510 kb on + strand at 939.510 kb on + strand at 939.510 kb on + strand at 939.511 kb on - strand at 939.511 kb on - strand at 939.511 kb on - strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.512 kb on + strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.513 kb on - strand at 939.677 kb on + strand at 939.677 kb on + strand at 939.677 kb on + strand at 939.677 kb on + strand at 939.677 kb on + strand at 939.677 kb on + strand at 939.677 kb on + strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.678 kb on - strand at 939.723 kb on + strand at 939.724 kb on - strand at 939.724 kb on - strand at 939.878 kb on + strand, within MPMX19_03521 at 939.878 kb on + strand, within MPMX19_03521 at 939.878 kb on + strand, within MPMX19_03521 at 939.878 kb on + strand, within MPMX19_03521 at 939.879 kb on - strand, within MPMX19_03521 at 939.879 kb on - strand, within MPMX19_03521 at 939.980 kb on + strand, within MPMX19_03521 at 939.980 kb on + strand, within MPMX19_03521 at 940.057 kb on + strand, within MPMX19_03521 at 940.058 kb on - strand, within MPMX19_03521 at 940.058 kb on - strand, within MPMX19_03521 at 940.142 kb on + strand, within MPMX19_03521 at 940.142 kb on + strand, within MPMX19_03521 at 940.142 kb on + strand, within MPMX19_03521 at 940.142 kb on + strand, within MPMX19_03521 at 940.142 kb on + strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.143 kb on - strand, within MPMX19_03521 at 940.148 kb on + strand, within MPMX19_03521 at 940.148 kb on + strand, within MPMX19_03521 at 940.148 kb on + strand, within MPMX19_03521 at 940.148 kb on + strand, within MPMX19_03521 at 940.148 kb on + strand, within MPMX19_03521 at 940.148 kb on + strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.149 kb on - strand, within MPMX19_03521 at 940.251 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.509 kb on + strand at 940.510 kb on - strand at 940.510 kb on - strand at 940.510 kb on - strand at 940.510 kb on - strand at 940.510 kb on - strand at 940.510 kb on - strand at 940.510 kb on - strand at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.806 kb on + strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.807 kb on - strand, within MPMX19_03522 at 940.808 kb on + strand, within MPMX19_03522 at 940.808 kb on + strand, within MPMX19_03522 at 940.808 kb on + strand, within MPMX19_03522 at 940.808 kb on + strand, within MPMX19_03522 at 940.809 kb on - strand, within MPMX19_03522 at 940.809 kb on - strand, within MPMX19_03522 at 940.809 kb on - strand, within MPMX19_03522 at 940.830 kb on + strand, within MPMX19_03522 at 940.830 kb on + strand, within MPMX19_03522 at 940.830 kb on + strand, within MPMX19_03522 at 940.831 kb on - strand, within MPMX19_03522 at 940.831 kb on - strand, within MPMX19_03522 at 940.831 kb on - strand, within MPMX19_03522 at 940.831 kb on - strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.941 kb on + strand, within MPMX19_03522 at 940.942 kb on - strand, within MPMX19_03522 at 940.942 kb on - strand, within MPMX19_03522 at 940.942 kb on - strand, within MPMX19_03522 at 940.942 kb on - strand, within MPMX19_03522 at 940.942 kb on - strand, within MPMX19_03522 at 940.942 kb on - strand, within MPMX19_03522 at 941.118 kb on + strand, within MPMX19_03522 at 941.118 kb on + strand, within MPMX19_03522
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 938,814 + MPMX19_03520 0.24 +0.1 938,814 + MPMX19_03520 0.24 -0.1 938,814 + MPMX19_03520 0.24 -1.3 938,814 + MPMX19_03520 0.24 +0.3 938,815 - MPMX19_03520 0.24 -0.2 938,815 - MPMX19_03520 0.24 +1.2 939,027 + MPMX19_03520 0.48 +1.1 939,027 + MPMX19_03520 0.48 +0.6 939,027 + MPMX19_03520 0.48 -1.1 939,027 + MPMX19_03520 0.48 +0.3 939,027 + MPMX19_03520 0.48 -0.2 939,027 + MPMX19_03520 0.48 +0.9 939,028 - MPMX19_03520 0.48 +0.2 939,028 - MPMX19_03520 0.48 +1.5 939,028 - MPMX19_03520 0.48 +0.5 939,028 - MPMX19_03520 0.48 -1.9 939,028 - MPMX19_03520 0.48 -0.7 939,028 - MPMX19_03520 0.48 -0.2 939,028 - MPMX19_03520 0.48 +1.0 939,073 - MPMX19_03520 0.53 +0.1 939,073 - MPMX19_03520 0.53 -1.7 939,084 + MPMX19_03520 0.54 -1.1 939,293 + MPMX19_03520 0.78 +0.3 939,293 + MPMX19_03520 0.78 -0.4 939,500 + -0.3 939,500 + -0.8 939,500 + -0.7 939,500 + -0.1 939,500 + -0.2 939,500 + -0.1 939,501 - -0.1 939,501 - +0.9 939,510 + +0.9 939,510 + +0.3 939,510 + -0.7 939,511 - -0.5 939,511 - +0.5 939,511 - +0.8 939,512 + -0.9 939,512 + -0.7 939,512 + -2.2 939,512 + -1.5 939,512 + -0.2 939,512 + -0.6 939,512 + -0.1 939,512 + -0.2 939,512 + -0.7 939,512 + -0.5 939,512 + -0.7 939,512 + -3.7 939,512 + -1.6 939,512 + -0.6 939,512 + +0.5 939,512 + -1.1 939,512 + -1.2 939,512 + -0.5 939,512 + +1.0 939,512 + -0.3 939,512 + -2.3 939,512 + -0.1 939,513 - -2.2 939,513 - +0.7 939,513 - -0.0 939,513 - +1.0 939,513 - +0.0 939,513 - +0.8 939,513 - -0.3 939,513 - -1.2 939,513 - +1.0 939,513 - -0.5 939,513 - -0.7 939,513 - -2.2 939,513 - +1.0 939,513 - -0.3 939,513 - +0.0 939,513 - -0.5 939,513 - +0.3 939,513 - +0.7 939,513 - -1.1 939,513 - -1.5 939,513 - -1.8 939,513 - +1.5 939,513 - -3.0 939,513 - +0.2 939,513 - -0.6 939,513 - +0.2 939,513 - -0.1 939,513 - +0.2 939,677 + +1.1 939,677 + +0.2 939,677 + -0.8 939,677 + -1.8 939,677 + -0.4 939,677 + +0.8 939,677 + -1.2 939,678 - +0.1 939,678 - -0.2 939,678 - +0.2 939,678 - -0.6 939,678 - +1.1 939,678 - -0.3 939,678 - -1.7 939,678 - -0.4 939,678 - -0.1 939,678 - -1.1 939,723 + -0.5 939,724 - -0.0 939,724 - -1.2 939,878 + MPMX19_03521 0.34 -0.4 939,878 + MPMX19_03521 0.34 -0.2 939,878 + MPMX19_03521 0.34 -1.4 939,878 + MPMX19_03521 0.34 -1.3 939,879 - MPMX19_03521 0.34 -0.3 939,879 - MPMX19_03521 0.34 -0.8 939,980 + MPMX19_03521 0.51 -1.4 939,980 + MPMX19_03521 0.51 -0.7 940,057 + MPMX19_03521 0.64 +0.1 940,058 - MPMX19_03521 0.64 -0.7 940,058 - MPMX19_03521 0.64 -1.1 940,142 + MPMX19_03521 0.77 -0.4 940,142 + MPMX19_03521 0.77 -1.1 940,142 + MPMX19_03521 0.77 -1.1 940,142 + MPMX19_03521 0.77 -0.8 940,142 + MPMX19_03521 0.77 -1.7 940,143 - MPMX19_03521 0.78 -0.9 940,143 - MPMX19_03521 0.78 -0.5 940,143 - MPMX19_03521 0.78 +1.0 940,143 - MPMX19_03521 0.78 +0.1 940,143 - MPMX19_03521 0.78 -0.4 940,143 - MPMX19_03521 0.78 +0.1 940,143 - MPMX19_03521 0.78 -0.1 940,143 - MPMX19_03521 0.78 +0.5 940,148 + MPMX19_03521 0.78 -0.9 940,148 + MPMX19_03521 0.78 -0.4 940,148 + MPMX19_03521 0.78 -0.7 940,148 + MPMX19_03521 0.78 -0.7 940,148 + MPMX19_03521 0.78 -0.5 940,148 + MPMX19_03521 0.78 -1.2 940,149 - MPMX19_03521 0.79 -0.7 940,149 - MPMX19_03521 0.79 +0.2 940,149 - MPMX19_03521 0.79 -0.8 940,149 - MPMX19_03521 0.79 -0.4 940,149 - MPMX19_03521 0.79 +0.3 940,149 - MPMX19_03521 0.79 +0.2 940,149 - MPMX19_03521 0.79 +1.5 940,149 - MPMX19_03521 0.79 -1.1 940,149 - MPMX19_03521 0.79 -1.2 940,251 + -0.9 940,509 + -1.1 940,509 + +0.9 940,509 + +0.5 940,509 + -0.8 940,509 + +0.3 940,509 + +0.4 940,509 + +0.2 940,509 + -1.4 940,510 - +0.6 940,510 - -2.4 940,510 - +0.5 940,510 - -0.9 940,510 - -1.0 940,510 - -0.4 940,510 - -1.3 940,806 + MPMX19_03522 0.21 +0.3 940,806 + MPMX19_03522 0.21 -1.0 940,806 + MPMX19_03522 0.21 +0.5 940,806 + MPMX19_03522 0.21 -1.1 940,806 + MPMX19_03522 0.21 -0.6 940,806 + MPMX19_03522 0.21 -0.5 940,806 + MPMX19_03522 0.21 -0.7 940,806 + MPMX19_03522 0.21 -0.3 940,806 + MPMX19_03522 0.21 -0.3 940,807 - MPMX19_03522 0.21 -2.1 940,807 - MPMX19_03522 0.21 -0.1 940,807 - MPMX19_03522 0.21 -0.9 940,807 - MPMX19_03522 0.21 -0.5 940,807 - MPMX19_03522 0.21 -0.9 940,807 - MPMX19_03522 0.21 -0.7 940,807 - MPMX19_03522 0.21 -0.8 940,807 - MPMX19_03522 0.21 -0.1 940,808 + MPMX19_03522 0.21 +0.0 940,808 + MPMX19_03522 0.21 +1.3 940,808 + MPMX19_03522 0.21 +0.1 940,808 + MPMX19_03522 0.21 -1.1 940,809 - MPMX19_03522 0.21 -0.1 940,809 - MPMX19_03522 0.21 -0.9 940,809 - MPMX19_03522 0.21 -0.9 940,830 + MPMX19_03522 0.22 +0.9 940,830 + MPMX19_03522 0.22 -1.0 940,830 + MPMX19_03522 0.22 -0.5 940,831 - MPMX19_03522 0.22 -1.0 940,831 - MPMX19_03522 0.22 -0.5 940,831 - MPMX19_03522 0.22 -0.9 940,831 - MPMX19_03522 0.22 -0.7 940,941 + MPMX19_03522 0.27 +0.5 940,941 + MPMX19_03522 0.27 -1.3 940,941 + MPMX19_03522 0.27 -0.2 940,941 + MPMX19_03522 0.27 +1.3 940,941 + MPMX19_03522 0.27 -0.7 940,941 + MPMX19_03522 0.27 -0.0 940,941 + MPMX19_03522 0.27 -1.3 940,941 + MPMX19_03522 0.27 -0.4 940,941 + MPMX19_03522 0.27 -1.6 940,941 + MPMX19_03522 0.27 -0.7 940,942 - MPMX19_03522 0.27 -0.3 940,942 - MPMX19_03522 0.27 +0.2 940,942 - MPMX19_03522 0.27 +1.7 940,942 - MPMX19_03522 0.27 -1.1 940,942 - MPMX19_03522 0.27 -0.7 940,942 - MPMX19_03522 0.27 +0.1 941,118 + MPMX19_03522 0.36 -0.7 941,118 + MPMX19_03522 0.36 -1.0
Or see this region's nucleotide sequence