Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01548

Experiment: NL-CCM; high oxygen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_01547 and MPMX19_01548 are separated by 286 nucleotidesMPMX19_01548 and MPMX19_01549 are separated by 112 nucleotides MPMX19_01547: MPMX19_01547 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,621,722 to 1,622,984 _01547 MPMX19_01548: MPMX19_01548 - ATP-dependent Clp protease proteolytic subunit, at 1,623,271 to 1,623,897 _01548 MPMX19_01549: MPMX19_01549 - Trigger factor, at 1,624,010 to 1,625,353 _01549 Position (kb) 1623 1624Strain fitness (log2 ratio) -2 -1 0 1at 1623.060 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.959 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.961 kb on - strandat 1623.984 kb on - strandat 1624.012 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; high oxygen
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1,623,060 - -0.4
1,623,959 - -0.3
1,623,959 - +0.7
1,623,959 - +0.3
1,623,959 - -2.1
1,623,959 - -1.8
1,623,959 - -0.9
1,623,959 - +0.1
1,623,959 - -0.3
1,623,959 - -0.5
1,623,959 - -1.6
1,623,959 - -0.6
1,623,959 - +0.5
1,623,959 - -1.6
1,623,959 - -0.8
1,623,959 - -0.3
1,623,961 - -0.9
1,623,961 - -0.1
1,623,961 - -0.8
1,623,961 - -0.5
1,623,961 - +0.1
1,623,961 - +0.1
1,623,961 - -0.1
1,623,961 - -0.8
1,623,961 - -0.1
1,623,984 - -2.7
1,624,012 - -1.6

Or see this region's nucleotide sequence