Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01542

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,614,066	+				-1.6
1,614,067	-				-0.7
1,614,067	-				-0.8
1,614,084	+				-1.1
1,614,084	+				-0.5
1,614,084	+				-2.3
1,614,084	+				-0.5
1,614,084	+				-0.1
1,614,084	+				+0.0
1,614,084	+				-2.4
1,614,084	+				-0.6
1,614,084	+				-0.9
1,614,084	+				+1.1
1,614,084	+				-1.3
1,614,084	+				-0.8
1,614,084	+				+1.2
1,614,084	+				-0.5
1,614,084	+				-2.1
1,614,084	+				-1.6
1,614,084	+				-1.3
1,614,085	-				+2.0
1,614,085	-				-0.3
1,614,085	-				-0.4
1,614,085	-				+1.1
1,614,085	-				-1.1
1,614,085	-				+0.1
1,614,085	-				-1.3
1,614,085	-				+1.0
1,614,085	-				+1.5
1,614,085	-				+0.7
1,614,085	-				+1.2
1,614,085	-				-0.7
1,614,085	-				+0.4
1,614,085	-				+1.3
1,614,085	-				+0.2
1,614,132	+				+0.2
1,614,132	+				-0.3
1,614,133	-				+0.1
1,614,133	-				-2.1
1,614,186	+				-0.2
1,614,186	+				+0.8
1,614,186	+				-0.5
1,614,186	+				-1.2
1,614,186	+				+0.5
1,614,186	+				-1.1
1,614,186	+				-0.1
1,614,187	-				-1.6
1,614,203	-				+0.2
1,614,203	-				-0.4
1,614,203	-				+1.1
1,614,325	+		MPMX19_01541	0.49	-0.5
1,614,437	+		MPMX19_01541	0.84	-1.3
1,614,437	+		MPMX19_01541	0.84	-0.3
1,614,437	+		MPMX19_01541	0.84	-1.3
1,614,437	+		MPMX19_01541	0.84	-0.1
1,614,437	+		MPMX19_01541	0.84	-2.3
1,614,438	-		MPMX19_01541	0.84	-0.6
1,614,438	-		MPMX19_01541	0.84	-1.5
1,614,438	-		MPMX19_01541	0.84	-0.1
1,614,438	-		MPMX19_01541	0.84	+0.4
1,614,438	-		MPMX19_01541	0.84	-1.8
1,614,438	-		MPMX19_01541	0.84	-0.5
1,614,510	+				-0.5
1,614,511	-				-1.2
1,614,511	-				-1.7
1,614,525	+				-0.2
1,614,525	+				-0.2
1,614,525	+				-0.8
1,614,525	+				-0.7
1,614,526	-				-0.9
1,614,526	-				-0.3
1,614,526	-				-0.1
1,614,526	-				-0.1
1,614,526	-				-0.3
1,614,526	-				-0.8
1,614,526	-				-3.5
1,614,526	-				-1.0
1,614,526	-				-0.8
1,614,526	-				+1.3
1,614,528	+				-1.6
1,614,528	+				-1.3
1,614,529	-				-0.9
1,614,529	-				+0.2
1,614,577	-				+0.3
1,614,577	-				-0.4
1,614,653	-				+0.2
1,614,741	+				+0.2
1,614,741	+				+0.5
1,614,742	-				-1.4
1,614,865	-				+0.3
1,615,060	+				-0.6
1,615,061	-				-0.6
1,615,150	+		MPMX19_01542	0.13	-0.9
1,615,150	+		MPMX19_01542	0.13	+0.1
1,615,150	+		MPMX19_01542	0.13	+1.3
1,615,151	-		MPMX19_01542	0.13	-0.7
1,615,276	+		MPMX19_01542	0.27	-2.3
1,615,276	+		MPMX19_01542	0.27	-0.1
1,615,296	+		MPMX19_01542	0.29	-0.3
1,615,296	+		MPMX19_01542	0.29	+0.1
1,615,296	+		MPMX19_01542	0.29	+0.7
1,615,296	+		MPMX19_01542	0.29	+0.7
1,615,296	+		MPMX19_01542	0.29	+0.2
1,615,296	+		MPMX19_01542	0.29	+1.2
1,615,296	+		MPMX19_01542	0.29	+0.0
1,615,297	-		MPMX19_01542	0.29	+0.1
1,615,297	-		MPMX19_01542	0.29	-1.6
1,615,297	-		MPMX19_01542	0.29	+1.3
1,615,297	-		MPMX19_01542	0.29	+0.4
1,615,297	-		MPMX19_01542	0.29	-0.7
1,615,338	+		MPMX19_01542	0.34	+0.5
1,615,338	+		MPMX19_01542	0.34	-1.1
1,615,338	+		MPMX19_01542	0.34	-0.4
1,615,338	+		MPMX19_01542	0.34	-0.8
1,615,338	+		MPMX19_01542	0.34	-0.1
1,615,338	+		MPMX19_01542	0.34	+0.0
1,615,338	+		MPMX19_01542	0.34	+0.1
1,615,338	+		MPMX19_01542	0.34	+0.1
1,615,338	+		MPMX19_01542	0.34	+0.9
1,615,338	+		MPMX19_01542	0.34	-0.4
1,615,338	+		MPMX19_01542	0.34	-0.2
1,615,338	+		MPMX19_01542	0.34	-0.0
1,615,339	-		MPMX19_01542	0.34	-2.2
1,615,339	-		MPMX19_01542	0.34	-0.8
1,615,339	-		MPMX19_01542	0.34	+0.5
1,615,339	-		MPMX19_01542	0.34	-0.3
1,615,339	-		MPMX19_01542	0.34	-0.8
1,615,339	-		MPMX19_01542	0.34	-2.1
1,615,339	-		MPMX19_01542	0.34	-0.4
1,615,339	-		MPMX19_01542	0.34	+0.1
1,615,339	-		MPMX19_01542	0.34	-1.1
1,615,339	-		MPMX19_01542	0.34	+0.2
1,615,339	-		MPMX19_01542	0.34	-1.3
1,615,339	-		MPMX19_01542	0.34	-0.3
1,615,339	-		MPMX19_01542	0.34	-1.6
1,615,339	-		MPMX19_01542	0.34	-0.1
1,615,339	-		MPMX19_01542	0.34	-1.7
1,615,339	-		MPMX19_01542	0.34	-1.2
1,615,339	-		MPMX19_01542	0.34	+0.4
1,615,339	-		MPMX19_01542	0.34	-0.2
1,615,447	+		MPMX19_01542	0.46	+0.3
1,615,447	+		MPMX19_01542	0.46	+0.5
1,615,448	-		MPMX19_01542	0.46	+0.2
1,615,448	-		MPMX19_01542	0.46	+0.1
1,615,590	+		MPMX19_01542	0.61	-0.5
1,615,590	+		MPMX19_01542	0.61	+0.4
1,615,590	+		MPMX19_01542	0.61	-0.3
1,615,590	+		MPMX19_01542	0.61	+0.0
1,615,590	+		MPMX19_01542	0.61	-0.1
1,615,590	+		MPMX19_01542	0.61	+1.3
1,615,789	+		MPMX19_01542	0.83	-0.1
1,615,789	+		MPMX19_01542	0.83	-1.5
1,615,789	+		MPMX19_01542	0.83	+0.5
1,615,790	-		MPMX19_01542	0.84	+0.8
1,615,790	-		MPMX19_01542	0.84	+0.9
1,615,790	-		MPMX19_01542	0.84	+0.8
1,615,790	-		MPMX19_01542	0.84	+1.0
1,615,804	+		MPMX19_01542	0.85	+0.7
1,615,804	+		MPMX19_01542	0.85	+0.2
1,615,804	+		MPMX19_01542	0.85	-1.9
1,615,804	+		MPMX19_01542	0.85	-0.9
1,615,804	+		MPMX19_01542	0.85	-0.6
1,615,804	+		MPMX19_01542	0.85	-0.7
1,615,804	+		MPMX19_01542	0.85	-1.1
1,615,805	-		MPMX19_01542	0.85	-0.2
1,615,805	-		MPMX19_01542	0.85	-0.6
1,615,805	-		MPMX19_01542	0.85	-0.6
1,615,805	-		MPMX19_01542	0.85	-2.2
1,615,805	-		MPMX19_01542	0.85	+1.3
1,615,880	+				+0.1
1,615,881	-				+0.1
1,615,881	-				-0.1
1,615,881	-				+1.0
1,615,963	-				-0.1
1,615,963	-				-0.2
1,615,963	-				-2.0
1,615,963	-				-0.4
1,615,963	-				+0.1
1,615,996	+				-1.1
1,615,996	+				+0.4
1,615,996	+				-0.7
1,615,996	+				-0.1
1,615,996	+				-1.0
1,615,996	+				-1.4
1,615,996	+				+0.5
1,615,996	+				-1.1
1,615,996	+				+0.0
1,615,996	+				-1.4
1,615,997	-				-1.7
1,615,997	-				-0.1
1,615,997	-				-1.6
1,615,997	-				-0.2
1,615,997	-				+0.8
1,615,997	-				-0.2
1,615,997	-				-0.3
1,615,997	-				+0.1
1,615,997	-				-0.5
1,615,997	-				-0.1
1,615,997	-				-0.5
1,615,997	-				+0.9
1,615,997	-				+0.5
1,615,997	-				+0.5
1,615,997	-				+0.2
1,615,997	-				-1.2
1,615,997	-				-1.3
1,615,997	-				-1.6
1,615,997	-				-0.3
1,615,997	-				+0.8
1,615,997	-				-0.3
1,615,997	-				+0.5
1,616,011	+				-0.5
1,616,076	+				-0.5
1,616,076	+				-0.3
1,616,076	+				-0.1
1,616,077	-				+1.2
1,616,077	-				+0.3
1,616,077	-				+0.2
1,616,231	-				-0.6
1,616,274	-				-0.3