Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00522 and MPMX19_00523 are separated by 114 nucleotides MPMX19_00523 and MPMX19_00524 are separated by 106 nucleotides MPMX19_00524 and MPMX19_00525 are separated by 196 nucleotides
MPMX19_00522: MPMX19_00522 - putative zinc protease, at 529,905 to 531,314
_00522
MPMX19_00523: MPMX19_00523 - hypothetical protein, at 531,429 to 532,019
_00523
MPMX19_00524: MPMX19_00524 - Lipoprotein signal peptidase, at 532,126 to 532,641
_00524
MPMX19_00525: MPMX19_00525 - Isoleucine--tRNA ligase, at 532,838 to 535,681
_00525
Position (kb) 531
532
533 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 530.554 kb on + strand, within MPMX19_00522 at 530.554 kb on + strand, within MPMX19_00522 at 530.555 kb on - strand, within MPMX19_00522 at 530.555 kb on - strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.557 kb on + strand, within MPMX19_00522 at 530.558 kb on - strand, within MPMX19_00522 at 530.558 kb on - strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.632 kb on + strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.633 kb on - strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.644 kb on + strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.645 kb on - strand, within MPMX19_00522 at 530.821 kb on + strand, within MPMX19_00522 at 530.911 kb on + strand, within MPMX19_00522 at 530.911 kb on + strand, within MPMX19_00522 at 530.911 kb on + strand, within MPMX19_00522 at 530.911 kb on + strand, within MPMX19_00522 at 530.911 kb on + strand, within MPMX19_00522 at 530.912 kb on - strand, within MPMX19_00522 at 530.912 kb on - strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.914 kb on + strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.915 kb on - strand, within MPMX19_00522 at 530.923 kb on + strand, within MPMX19_00522 at 530.923 kb on + strand, within MPMX19_00522 at 530.924 kb on - strand, within MPMX19_00522 at 530.924 kb on - strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.929 kb on + strand, within MPMX19_00522 at 530.930 kb on - strand, within MPMX19_00522 at 530.930 kb on - strand, within MPMX19_00522 at 530.930 kb on - strand, within MPMX19_00522 at 530.930 kb on - strand, within MPMX19_00522 at 530.930 kb on - strand, within MPMX19_00522 at 530.930 kb on - strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.082 kb on + strand, within MPMX19_00522 at 531.083 kb on - strand, within MPMX19_00522 at 531.083 kb on - strand, within MPMX19_00522 at 531.083 kb on - strand, within MPMX19_00522 at 531.083 kb on - strand, within MPMX19_00522 at 531.083 kb on - strand, within MPMX19_00522 at 531.083 kb on - strand, within MPMX19_00522 at 531.430 kb on + strand at 531.430 kb on + strand at 531.430 kb on + strand at 531.430 kb on + strand at 531.430 kb on + strand at 531.431 kb on - strand at 531.431 kb on - strand at 531.431 kb on - strand at 531.431 kb on - strand at 532.051 kb on - strand at 532.051 kb on - strand at 532.051 kb on - strand at 532.101 kb on + strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.725 kb on - strand at 532.813 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 530,554 + MPMX19_00522 0.46 -0.8 530,554 + MPMX19_00522 0.46 -0.5 530,555 - MPMX19_00522 0.46 +0.1 530,555 - MPMX19_00522 0.46 -1.4 530,557 + MPMX19_00522 0.46 -1.2 530,557 + MPMX19_00522 0.46 +0.1 530,557 + MPMX19_00522 0.46 +0.1 530,557 + MPMX19_00522 0.46 -1.4 530,557 + MPMX19_00522 0.46 -0.8 530,557 + MPMX19_00522 0.46 -0.8 530,557 + MPMX19_00522 0.46 -1.9 530,558 - MPMX19_00522 0.46 +0.8 530,558 - MPMX19_00522 0.46 +0.4 530,632 + MPMX19_00522 0.52 -0.8 530,632 + MPMX19_00522 0.52 -1.0 530,632 + MPMX19_00522 0.52 -0.2 530,632 + MPMX19_00522 0.52 -1.2 530,632 + MPMX19_00522 0.52 -0.6 530,632 + MPMX19_00522 0.52 -2.1 530,632 + MPMX19_00522 0.52 -0.3 530,632 + MPMX19_00522 0.52 -1.4 530,632 + MPMX19_00522 0.52 -2.1 530,632 + MPMX19_00522 0.52 -1.1 530,632 + MPMX19_00522 0.52 -1.1 530,632 + MPMX19_00522 0.52 -2.9 530,633 - MPMX19_00522 0.52 -0.3 530,633 - MPMX19_00522 0.52 -0.2 530,633 - MPMX19_00522 0.52 +0.6 530,633 - MPMX19_00522 0.52 -0.4 530,633 - MPMX19_00522 0.52 -0.8 530,633 - MPMX19_00522 0.52 -1.4 530,633 - MPMX19_00522 0.52 -1.4 530,644 + MPMX19_00522 0.52 -1.8 530,644 + MPMX19_00522 0.52 -0.8 530,644 + MPMX19_00522 0.52 -0.7 530,644 + MPMX19_00522 0.52 -0.3 530,644 + MPMX19_00522 0.52 -0.0 530,644 + MPMX19_00522 0.52 -0.0 530,644 + MPMX19_00522 0.52 -0.7 530,644 + MPMX19_00522 0.52 -0.4 530,645 - MPMX19_00522 0.52 +0.6 530,645 - MPMX19_00522 0.52 -1.6 530,645 - MPMX19_00522 0.52 -0.4 530,645 - MPMX19_00522 0.52 +1.1 530,645 - MPMX19_00522 0.52 -1.2 530,645 - MPMX19_00522 0.52 +0.2 530,645 - MPMX19_00522 0.52 -2.4 530,645 - MPMX19_00522 0.52 -1.2 530,645 - MPMX19_00522 0.52 -1.9 530,645 - MPMX19_00522 0.52 -0.9 530,645 - MPMX19_00522 0.52 -0.8 530,645 - MPMX19_00522 0.52 +1.0 530,821 + MPMX19_00522 0.65 -0.6 530,911 + MPMX19_00522 0.71 -0.4 530,911 + MPMX19_00522 0.71 +0.3 530,911 + MPMX19_00522 0.71 +1.0 530,911 + MPMX19_00522 0.71 -0.6 530,911 + MPMX19_00522 0.71 -0.6 530,912 - MPMX19_00522 0.71 -0.4 530,912 - MPMX19_00522 0.71 +0.2 530,914 + MPMX19_00522 0.72 -0.0 530,914 + MPMX19_00522 0.72 -1.2 530,914 + MPMX19_00522 0.72 -0.8 530,914 + MPMX19_00522 0.72 -0.1 530,914 + MPMX19_00522 0.72 -1.5 530,914 + MPMX19_00522 0.72 -0.9 530,914 + MPMX19_00522 0.72 +0.3 530,914 + MPMX19_00522 0.72 -0.4 530,914 + MPMX19_00522 0.72 -2.0 530,914 + MPMX19_00522 0.72 +0.3 530,914 + MPMX19_00522 0.72 +0.5 530,915 - MPMX19_00522 0.72 -0.7 530,915 - MPMX19_00522 0.72 -0.8 530,915 - MPMX19_00522 0.72 -0.4 530,915 - MPMX19_00522 0.72 -0.2 530,915 - MPMX19_00522 0.72 -0.0 530,915 - MPMX19_00522 0.72 -0.7 530,915 - MPMX19_00522 0.72 -0.4 530,915 - MPMX19_00522 0.72 +0.5 530,923 + MPMX19_00522 0.72 -1.3 530,923 + MPMX19_00522 0.72 -0.5 530,924 - MPMX19_00522 0.72 +0.1 530,924 - MPMX19_00522 0.72 -0.9 530,929 + MPMX19_00522 0.73 -0.6 530,929 + MPMX19_00522 0.73 -0.9 530,929 + MPMX19_00522 0.73 -0.8 530,929 + MPMX19_00522 0.73 -1.4 530,929 + MPMX19_00522 0.73 +0.7 530,929 + MPMX19_00522 0.73 -0.7 530,929 + MPMX19_00522 0.73 -0.4 530,929 + MPMX19_00522 0.73 -0.5 530,929 + MPMX19_00522 0.73 -0.7 530,929 + MPMX19_00522 0.73 +0.6 530,930 - MPMX19_00522 0.73 -1.0 530,930 - MPMX19_00522 0.73 -0.0 530,930 - MPMX19_00522 0.73 -0.7 530,930 - MPMX19_00522 0.73 -0.7 530,930 - MPMX19_00522 0.73 -0.7 530,930 - MPMX19_00522 0.73 +0.2 531,082 + MPMX19_00522 0.83 -1.6 531,082 + MPMX19_00522 0.83 -1.2 531,082 + MPMX19_00522 0.83 -0.4 531,082 + MPMX19_00522 0.83 -0.4 531,082 + MPMX19_00522 0.83 -0.5 531,082 + MPMX19_00522 0.83 -0.6 531,082 + MPMX19_00522 0.83 -0.9 531,082 + MPMX19_00522 0.83 -1.2 531,082 + MPMX19_00522 0.83 -1.0 531,082 + MPMX19_00522 0.83 -1.0 531,082 + MPMX19_00522 0.83 -1.8 531,083 - MPMX19_00522 0.84 -0.4 531,083 - MPMX19_00522 0.84 -0.1 531,083 - MPMX19_00522 0.84 -0.8 531,083 - MPMX19_00522 0.84 +0.7 531,083 - MPMX19_00522 0.84 +0.3 531,083 - MPMX19_00522 0.84 -0.8 531,430 + +0.6 531,430 + -0.6 531,430 + -0.8 531,430 + +0.2 531,430 + +0.7 531,431 - -0.8 531,431 - -0.1 531,431 - -0.6 531,431 - -0.3 532,051 - -1.2 532,051 - -0.2 532,051 - +0.6 532,101 + -1.9 532,102 - -2.5 532,102 - +0.6 532,102 - -0.8 532,102 - -0.4 532,102 - -2.0 532,102 - -1.2 532,104 - -0.8 532,104 - -1.8 532,104 - -1.3 532,104 - -0.5 532,104 - -1.1 532,104 - +0.8 532,104 - -1.3 532,128 - -0.3 532,128 - +0.7 532,128 - -1.1 532,128 - -1.2 532,128 - +0.3 532,128 - -0.8 532,638 - -1.3 532,638 - -1.3 532,638 - +0.3 532,638 - +0.1 532,638 - +0.8 532,638 - -1.1 532,638 - -1.8 532,638 - -2.4 532,638 - -1.6 532,638 - +2.1 532,638 - -0.8 532,638 - +0.6 532,638 - -0.5 532,638 - -1.0 532,638 - -0.5 532,638 - +1.0 532,638 - -0.2 532,638 - -0.6 532,638 - -1.2 532,638 - -0.6 532,638 - -1.2 532,638 - +0.2 532,638 - -2.1 532,638 - -1.0 532,638 - -0.8 532,638 - +0.4 532,638 - +0.4 532,638 - +0.0 532,638 - -0.7 532,638 - -0.6 532,638 - +0.6 532,638 - -0.0 532,638 - -0.3 532,638 - +0.6 532,638 - -1.2 532,638 - -1.5 532,725 - -0.6 532,813 - -1.0
Or see this region's nucleotide sequence