Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF914 and GFF915 are separated by 35 nucleotides GFF915 and GFF916 are separated by 141 nucleotides GFF916 and GFF917 are separated by 36 nucleotides
GFF914 - hypothetical protein, at 985,388 to 985,900
GFF914
GFF915 - Glucosyl-3-phosphoglycerate phosphatase, at 985,936 to 986,523
GFF915
GFF916 - hypothetical protein, at 986,665 to 987,417
GFF916
GFF917 - hypothetical protein, at 987,454 to 988,782
GFF917
Position (kb) 986
987
988 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 985.799 kb on + strand, within GFF914 at 985.799 kb on + strand, within GFF914 at 985.800 kb on - strand, within GFF914 at 985.800 kb on - strand, within GFF914 at 985.847 kb on + strand, within GFF914 at 985.868 kb on + strand at 985.868 kb on + strand at 985.868 kb on + strand at 985.868 kb on + strand at 985.868 kb on + strand at 985.869 kb on - strand at 985.878 kb on + strand at 985.879 kb on - strand at 986.105 kb on - strand, within GFF915 at 986.263 kb on + strand, within GFF915 at 986.263 kb on + strand, within GFF915 at 986.418 kb on - strand, within GFF915 at 986.418 kb on - strand, within GFF915 at 986.454 kb on + strand, within GFF915 at 986.486 kb on - strand at 986.752 kb on + strand, within GFF916 at 986.752 kb on + strand, within GFF916 at 986.752 kb on + strand, within GFF916 at 986.753 kb on - strand, within GFF916 at 986.753 kb on - strand, within GFF916 at 986.753 kb on - strand, within GFF916 at 987.187 kb on + strand, within GFF916 at 987.188 kb on - strand, within GFF916 at 987.339 kb on - strand, within GFF916 at 987.361 kb on - strand at 987.380 kb on - strand at 987.567 kb on + strand at 987.690 kb on + strand, within GFF917 at 987.708 kb on - strand, within GFF917 at 987.708 kb on - strand, within GFF917 at 987.708 kb on - strand, within GFF917 at 987.938 kb on + strand, within GFF917 at 987.939 kb on - strand, within GFF917 at 987.939 kb on - strand, within GFF917 at 987.939 kb on - strand, within GFF917 at 988.098 kb on + strand, within GFF917 at 988.098 kb on + strand, within GFF917
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 985,799 + GFF914 0.80 +0.0 985,799 + GFF914 0.80 -0.6 985,800 - GFF914 0.80 +1.2 985,800 - GFF914 0.80 +0.2 985,847 + GFF914 0.89 -0.0 985,868 + +1.5 985,868 + -0.3 985,868 + -1.7 985,868 + +0.1 985,868 + +0.3 985,869 - -0.4 985,878 + -0.4 985,879 - +0.4 986,105 - GFF915 0.29 -1.2 986,263 + GFF915 0.56 -0.6 986,263 + GFF915 0.56 +0.3 986,418 - GFF915 0.82 +0.8 986,418 - GFF915 0.82 -0.2 986,454 + GFF915 0.88 +1.0 986,486 - +0.9 986,752 + GFF916 0.12 -1.9 986,752 + GFF916 0.12 -0.2 986,752 + GFF916 0.12 -0.3 986,753 - GFF916 0.12 +0.3 986,753 - GFF916 0.12 -0.3 986,753 - GFF916 0.12 -0.5 987,187 + GFF916 0.69 -1.6 987,188 - GFF916 0.69 -0.7 987,339 - GFF916 0.90 +0.2 987,361 - -1.0 987,380 - +0.3 987,567 + -0.7 987,690 + GFF917 0.18 -2.2 987,708 - GFF917 0.19 -0.9 987,708 - GFF917 0.19 -0.1 987,708 - GFF917 0.19 -0.5 987,938 + GFF917 0.36 -2.0 987,939 - GFF917 0.36 -2.5 987,939 - GFF917 0.36 -2.8 987,939 - GFF917 0.36 -1.9 988,098 + GFF917 0.48 -1.0 988,098 + GFF917 0.48 +0.7
Or see this region's nucleotide sequence