Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF908 and GFF909 are separated by 189 nucleotides GFF909 and GFF910 are separated by 4 nucleotides GFF910 and GFF911 are separated by 194 nucleotides
GFF908 - Carbonic anhydrase 1, at 978,902 to 979,513
GFF908
GFF909 - Magnesium transporter MgtE, at 979,703 to 981,043
GFF909
GFF910 - hypothetical protein, at 981,048 to 981,308
GFF910
GFF911 - hypothetical protein, at 981,503 to 982,843
GFF911
Position (kb) 979
980
981
982 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 978.709 kb on + strand at 979.544 kb on + strand at 979.545 kb on - strand at 979.602 kb on + strand at 979.606 kb on - strand at 979.702 kb on + strand at 979.702 kb on + strand at 979.703 kb on - strand at 979.703 kb on - strand at 979.810 kb on + strand at 979.810 kb on + strand at 979.810 kb on + strand at 979.811 kb on - strand at 979.811 kb on - strand at 979.811 kb on - strand at 979.944 kb on + strand, within GFF909 at 979.944 kb on + strand, within GFF909 at 979.944 kb on + strand, within GFF909 at 979.944 kb on + strand, within GFF909 at 979.945 kb on - strand, within GFF909 at 980.153 kb on + strand, within GFF909 at 980.154 kb on - strand, within GFF909 at 980.154 kb on - strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.163 kb on - strand, within GFF909 at 980.163 kb on - strand, within GFF909 at 980.264 kb on + strand, within GFF909 at 980.265 kb on - strand, within GFF909 at 980.265 kb on - strand, within GFF909 at 980.265 kb on - strand, within GFF909 at 980.328 kb on - strand, within GFF909 at 980.471 kb on + strand, within GFF909 at 980.472 kb on - strand, within GFF909 at 980.472 kb on - strand, within GFF909 at 980.819 kb on + strand, within GFF909 at 980.820 kb on - strand, within GFF909 at 981.000 kb on - strand at 981.083 kb on - strand, within GFF910 at 981.314 kb on + strand at 981.314 kb on + strand at 981.314 kb on + strand at 981.315 kb on - strand at 981.338 kb on + strand at 981.338 kb on + strand at 981.338 kb on + strand at 981.418 kb on + strand at 981.418 kb on + strand at 981.726 kb on + strand, within GFF911 at 981.726 kb on + strand, within GFF911
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 978,709 + -0.2 979,544 + +0.1 979,545 - +0.2 979,602 + -0.1 979,606 - +0.1 979,702 + -0.1 979,702 + +0.6 979,703 - +0.5 979,703 - -0.2 979,810 + +0.7 979,810 + -0.3 979,810 + -0.4 979,811 - -0.4 979,811 - +0.3 979,811 - +0.5 979,944 + GFF909 0.18 -0.2 979,944 + GFF909 0.18 +0.2 979,944 + GFF909 0.18 -0.2 979,944 + GFF909 0.18 -0.2 979,945 - GFF909 0.18 +0.6 980,153 + GFF909 0.34 -0.4 980,154 - GFF909 0.34 -0.9 980,154 - GFF909 0.34 +0.1 980,162 + GFF909 0.34 -0.7 980,162 + GFF909 0.34 -2.8 980,162 + GFF909 0.34 +0.3 980,162 + GFF909 0.34 -1.9 980,162 + GFF909 0.34 -0.6 980,162 + GFF909 0.34 -2.0 980,163 - GFF909 0.34 -0.5 980,163 - GFF909 0.34 -1.5 980,264 + GFF909 0.42 -0.6 980,265 - GFF909 0.42 -0.9 980,265 - GFF909 0.42 +0.4 980,265 - GFF909 0.42 -0.4 980,328 - GFF909 0.47 -0.2 980,471 + GFF909 0.57 -0.1 980,472 - GFF909 0.57 -0.1 980,472 - GFF909 0.57 +0.7 980,819 + GFF909 0.83 -0.1 980,820 - GFF909 0.83 -0.7 981,000 - +1.5 981,083 - GFF910 0.13 +1.5 981,314 + +1.6 981,314 + +0.6 981,314 + +0.3 981,315 - -0.1 981,338 + -0.2 981,338 + +0.1 981,338 + -0.1 981,418 + -0.3 981,418 + +0.3 981,726 + GFF911 0.17 +1.6 981,726 + GFF911 0.17 -0.6
Or see this region's nucleotide sequence