Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF807 and GFF808 are separated by 121 nucleotides GFF808 and GFF809 are separated by 17 nucleotides GFF809 and GFF810 are separated by 18 nucleotides
GFF807 - hypothetical protein, at 862,801 to 863,913
GFF807
GFF808 - Dimethyl-sulfide monooxygenase, at 864,035 to 865,414
GFF808
GFF809 - hypothetical protein, at 865,432 to 865,626
GFF809
GFF810 - Dimethyl-sulfide monooxygenase, at 865,645 to 867,093
GFF810
Position (kb) 864
865
866 Strain fitness (log2 ratio) -2
-1
0
1 at 863.118 kb on - strand, within GFF807 at 863.285 kb on + strand, within GFF807 at 863.285 kb on + strand, within GFF807 at 863.286 kb on - strand, within GFF807 at 863.286 kb on - strand, within GFF807 at 863.333 kb on + strand, within GFF807 at 863.573 kb on + strand, within GFF807 at 863.869 kb on + strand at 863.869 kb on + strand at 863.884 kb on + strand at 863.885 kb on - strand at 864.061 kb on - strand at 864.132 kb on + strand at 864.133 kb on - strand at 864.144 kb on + strand at 864.145 kb on - strand at 864.200 kb on - strand, within GFF808 at 864.200 kb on - strand, within GFF808 at 864.510 kb on + strand, within GFF808 at 864.510 kb on + strand, within GFF808 at 864.511 kb on - strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.909 kb on + strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.942 kb on + strand, within GFF808 at 864.943 kb on - strand, within GFF808 at 864.943 kb on - strand, within GFF808 at 865.003 kb on - strand, within GFF808 at 865.219 kb on - strand, within GFF808 at 865.219 kb on - strand, within GFF808 at 865.318 kb on - strand at 865.318 kb on - strand at 865.318 kb on - strand at 865.740 kb on - strand at 865.769 kb on + strand at 865.770 kb on - strand at 865.770 kb on - strand at 865.832 kb on + strand, within GFF810 at 865.854 kb on - strand, within GFF810 at 865.854 kb on - strand, within GFF810 at 866.154 kb on - strand, within GFF810 at 866.318 kb on - strand, within GFF810 at 866.414 kb on + strand, within GFF810 at 866.414 kb on + strand, within GFF810
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 863,118 - GFF807 0.28 -0.2 863,285 + GFF807 0.43 +1.5 863,285 + GFF807 0.43 +0.1 863,286 - GFF807 0.44 -0.7 863,286 - GFF807 0.44 +0.5 863,333 + GFF807 0.48 -2.4 863,573 + GFF807 0.69 +0.5 863,869 + -0.8 863,869 + -0.7 863,884 + +0.8 863,885 - +0.2 864,061 - -2.3 864,132 + -0.2 864,133 - -0.2 864,144 + +0.3 864,145 - +0.3 864,200 - GFF808 0.12 +0.5 864,200 - GFF808 0.12 -1.0 864,510 + GFF808 0.34 -0.5 864,510 + GFF808 0.34 -0.1 864,511 - GFF808 0.34 -1.0 864,747 + GFF808 0.52 +1.3 864,747 + GFF808 0.52 +0.5 864,747 + GFF808 0.52 -0.2 864,909 + GFF808 0.63 -0.5 864,910 - GFF808 0.63 +0.3 864,910 - GFF808 0.63 +0.5 864,910 - GFF808 0.63 -0.2 864,942 + GFF808 0.66 -0.8 864,943 - GFF808 0.66 -0.5 864,943 - GFF808 0.66 -0.1 865,003 - GFF808 0.70 -0.3 865,219 - GFF808 0.86 -0.1 865,219 - GFF808 0.86 -0.3 865,318 - -0.7 865,318 - -0.2 865,318 - +0.7 865,740 - -0.1 865,769 + -0.3 865,770 - +0.3 865,770 - +0.7 865,832 + GFF810 0.13 +1.1 865,854 - GFF810 0.14 -0.4 865,854 - GFF810 0.14 -0.0 866,154 - GFF810 0.35 +0.3 866,318 - GFF810 0.46 -0.2 866,414 + GFF810 0.53 +0.8 866,414 + GFF810 0.53 -1.2
Or see this region's nucleotide sequence