Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF774 and GFF775 are separated by 3 nucleotides GFF775 and GFF776 overlap by 4 nucleotides GFF776 and GFF777 overlap by 11 nucleotides
GFF774 - hypothetical protein, at 826,381 to 827,454
GFF774
GFF775 - Aliphatic sulfonates import ATP-binding protein SsuB, at 827,458 to 828,273
GFF775
GFF776 - Putative aliphatic sulfonates transport permease protein SsuC, at 828,270 to 829,094
GFF776
GFF777 - Putative aliphatic sulfonates transport permease protein SsuC, at 829,084 to 829,965
GFF777
Position (kb) 827
828
829 Strain fitness (log2 ratio) -1
0
1
2 at 826.486 kb on + strand at 826.487 kb on - strand at 826.608 kb on - strand, within GFF774 at 826.608 kb on - strand, within GFF774 at 826.972 kb on - strand, within GFF774 at 827.225 kb on + strand, within GFF774 at 827.225 kb on + strand, within GFF774 at 827.232 kb on + strand, within GFF774 at 827.232 kb on + strand, within GFF774 at 827.233 kb on - strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.251 kb on + strand, within GFF774 at 827.252 kb on - strand, within GFF774 at 827.252 kb on - strand, within GFF774 at 827.252 kb on - strand, within GFF774 at 827.253 kb on + strand, within GFF774 at 827.253 kb on + strand, within GFF774 at 827.253 kb on + strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.254 kb on - strand, within GFF774 at 827.359 kb on + strand at 828.048 kb on - strand, within GFF775 at 828.048 kb on - strand, within GFF775 at 828.048 kb on - strand, within GFF775 at 828.048 kb on - strand, within GFF775 at 828.189 kb on - strand, within GFF775 at 828.469 kb on + strand, within GFF776 at 828.470 kb on - strand, within GFF776 at 828.538 kb on + strand, within GFF776 at 828.538 kb on + strand, within GFF776 at 828.538 kb on + strand, within GFF776 at 828.539 kb on - strand, within GFF776 at 828.539 kb on - strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.929 kb on - strand, within GFF776 at 828.929 kb on - strand, within GFF776 at 829.238 kb on + strand, within GFF777
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 826,486 + -1.1 826,487 - -0.5 826,608 - GFF774 0.21 -1.1 826,608 - GFF774 0.21 -0.3 826,972 - GFF774 0.55 -0.8 827,225 + GFF774 0.79 -0.3 827,225 + GFF774 0.79 +0.6 827,232 + GFF774 0.79 -0.3 827,232 + GFF774 0.79 -0.3 827,233 - GFF774 0.79 -0.3 827,251 + GFF774 0.81 -1.0 827,251 + GFF774 0.81 -0.8 827,251 + GFF774 0.81 +0.0 827,251 + GFF774 0.81 -0.5 827,252 - GFF774 0.81 +0.5 827,252 - GFF774 0.81 +0.3 827,252 - GFF774 0.81 -1.0 827,253 + GFF774 0.81 -0.4 827,253 + GFF774 0.81 +0.1 827,253 + GFF774 0.81 -0.3 827,254 - GFF774 0.81 -0.5 827,254 - GFF774 0.81 +0.8 827,254 - GFF774 0.81 +0.1 827,254 - GFF774 0.81 -1.0 827,254 - GFF774 0.81 +0.4 827,359 + +0.4 828,048 - GFF775 0.72 +1.1 828,048 - GFF775 0.72 +0.9 828,048 - GFF775 0.72 -0.8 828,048 - GFF775 0.72 -0.1 828,189 - GFF775 0.90 +0.7 828,469 + GFF776 0.24 +0.0 828,470 - GFF776 0.24 -0.1 828,538 + GFF776 0.32 +0.3 828,538 + GFF776 0.32 +2.1 828,538 + GFF776 0.32 +0.1 828,539 - GFF776 0.33 -0.9 828,539 - GFF776 0.33 +0.2 828,928 + GFF776 0.80 +1.0 828,928 + GFF776 0.80 -0.4 828,928 + GFF776 0.80 -1.1 828,928 + GFF776 0.80 -0.2 828,928 + GFF776 0.80 +0.3 828,929 - GFF776 0.80 -0.3 828,929 - GFF776 0.80 -0.6 829,238 + GFF777 0.17 -0.4
Or see this region's nucleotide sequence