Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4913 and GFF4914 are separated by 8 nucleotides GFF4914 and GFF4915 are separated by 78 nucleotides
GFF4913 - Cobalt-zinc-cadmium resistance protein CzcA, at 16,919 to 20,050
GFF4913
GFF4914 - hypothetical protein, at 20,059 to 21,699
GFF4914
GFF4915 - Adaptive-response sensory-kinase SasA, at 21,778 to 23,100
GFF4915
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1 at 19.225 kb on + strand, within GFF4913 at 19.225 kb on + strand, within GFF4913 at 19.225 kb on + strand, within GFF4913 at 19.225 kb on + strand, within GFF4913 at 19.225 kb on + strand, within GFF4913 at 19.226 kb on - strand, within GFF4913 at 19.226 kb on - strand, within GFF4913 at 19.226 kb on - strand, within GFF4913 at 19.226 kb on - strand, within GFF4913 at 19.227 kb on + strand, within GFF4913 at 19.227 kb on + strand, within GFF4913 at 19.228 kb on - strand, within GFF4913 at 19.461 kb on + strand, within GFF4913 at 19.461 kb on + strand, within GFF4913 at 19.462 kb on - strand, within GFF4913 at 19.770 kb on + strand at 19.770 kb on + strand at 19.966 kb on - strand at 19.974 kb on + strand at 20.375 kb on - strand, within GFF4914 at 20.801 kb on + strand, within GFF4914 at 20.801 kb on + strand, within GFF4914 at 20.801 kb on + strand, within GFF4914 at 20.801 kb on + strand, within GFF4914 at 20.801 kb on + strand, within GFF4914 at 20.802 kb on - strand, within GFF4914 at 20.802 kb on - strand, within GFF4914 at 20.802 kb on - strand, within GFF4914 at 20.802 kb on - strand, within GFF4914 at 21.286 kb on + strand, within GFF4914 at 21.389 kb on + strand, within GFF4914 at 21.389 kb on + strand, within GFF4914 at 21.390 kb on - strand, within GFF4914 at 21.390 kb on - strand, within GFF4914 at 21.390 kb on - strand, within GFF4914 at 21.390 kb on - strand, within GFF4914 at 21.498 kb on + strand, within GFF4914 at 21.498 kb on + strand, within GFF4914 at 21.498 kb on + strand, within GFF4914 at 21.499 kb on - strand, within GFF4914 at 21.499 kb on - strand, within GFF4914 at 21.499 kb on - strand, within GFF4914 at 21.720 kb on + strand at 21.720 kb on + strand at 21.721 kb on - strand at 21.776 kb on + strand at 21.776 kb on + strand at 21.776 kb on + strand at 21.777 kb on - strand at 22.192 kb on - strand, within GFF4915 at 22.256 kb on + strand, within GFF4915 at 22.256 kb on + strand, within GFF4915 at 22.256 kb on + strand, within GFF4915 at 22.257 kb on - strand, within GFF4915 at 22.257 kb on - strand, within GFF4915
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 19,225 + GFF4913 0.74 +0.0 19,225 + GFF4913 0.74 -0.4 19,225 + GFF4913 0.74 +0.9 19,225 + GFF4913 0.74 -0.1 19,225 + GFF4913 0.74 -0.7 19,226 - GFF4913 0.74 -0.6 19,226 - GFF4913 0.74 +0.5 19,226 - GFF4913 0.74 +0.1 19,226 - GFF4913 0.74 +1.2 19,227 + GFF4913 0.74 +1.1 19,227 + GFF4913 0.74 +0.7 19,228 - GFF4913 0.74 +0.6 19,461 + GFF4913 0.81 -0.2 19,461 + GFF4913 0.81 +0.9 19,462 - GFF4913 0.81 +0.6 19,770 + +1.1 19,770 + +0.1 19,966 - +1.0 19,974 + -0.6 20,375 - GFF4914 0.19 +0.6 20,801 + GFF4914 0.45 -0.7 20,801 + GFF4914 0.45 -0.2 20,801 + GFF4914 0.45 -0.5 20,801 + GFF4914 0.45 -0.3 20,801 + GFF4914 0.45 -0.2 20,802 - GFF4914 0.45 +0.2 20,802 - GFF4914 0.45 -0.1 20,802 - GFF4914 0.45 -1.4 20,802 - GFF4914 0.45 +0.6 21,286 + GFF4914 0.75 +0.3 21,389 + GFF4914 0.81 -0.4 21,389 + GFF4914 0.81 +0.5 21,390 - GFF4914 0.81 -0.3 21,390 - GFF4914 0.81 -0.8 21,390 - GFF4914 0.81 +0.4 21,390 - GFF4914 0.81 -0.3 21,498 + GFF4914 0.88 -0.1 21,498 + GFF4914 0.88 -0.3 21,498 + GFF4914 0.88 +1.5 21,499 - GFF4914 0.88 +0.0 21,499 - GFF4914 0.88 -0.9 21,499 - GFF4914 0.88 -0.1 21,720 + -1.4 21,720 + -1.1 21,721 - -0.6 21,776 + -1.1 21,776 + +0.2 21,776 + -1.4 21,777 - -0.1 22,192 - GFF4915 0.31 -0.7 22,256 + GFF4915 0.36 +0.3 22,256 + GFF4915 0.36 -2.3 22,256 + GFF4915 0.36 -1.7 22,257 - GFF4915 0.36 -0.1 22,257 - GFF4915 0.36 -0.1
Or see this region's nucleotide sequence