Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4823 and GFF4824 are separated by 0 nucleotides GFF4824 and GFF4825 are separated by 869 nucleotides
GFF4823 - hypothetical protein, at 63,491 to 64,423
GFF4823
GFF4824 - hypothetical protein, at 64,424 to 64,924
GFF4824
GFF4825 - 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase, at 65,794 to 66,468
GFF4825
Position (kb) 64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 63.492 kb on + strand at 63.492 kb on + strand at 63.493 kb on - strand at 63.528 kb on - strand at 63.555 kb on + strand at 63.555 kb on + strand at 63.556 kb on - strand at 63.556 kb on - strand at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.644 kb on - strand, within GFF4823 at 63.762 kb on + strand, within GFF4823 at 63.762 kb on + strand, within GFF4823 at 63.763 kb on - strand, within GFF4823 at 63.819 kb on + strand, within GFF4823 at 63.819 kb on + strand, within GFF4823 at 63.819 kb on + strand, within GFF4823 at 63.820 kb on - strand, within GFF4823 at 63.873 kb on + strand, within GFF4823 at 63.873 kb on + strand, within GFF4823 at 63.873 kb on + strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.918 kb on + strand, within GFF4823 at 63.969 kb on + strand, within GFF4823 at 63.970 kb on - strand, within GFF4823 at 64.024 kb on + strand, within GFF4823 at 64.025 kb on - strand, within GFF4823 at 64.042 kb on + strand, within GFF4823 at 64.043 kb on - strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.069 kb on - strand, within GFF4823 at 64.160 kb on - strand, within GFF4823 at 64.160 kb on - strand, within GFF4823 at 64.257 kb on + strand, within GFF4823 at 64.258 kb on - strand, within GFF4823 at 64.258 kb on - strand, within GFF4823 at 64.287 kb on + strand, within GFF4823 at 64.287 kb on + strand, within GFF4823 at 64.339 kb on - strand at 64.360 kb on - strand at 64.360 kb on - strand at 64.426 kb on - strand at 64.426 kb on - strand at 64.426 kb on - strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.450 kb on - strand at 64.450 kb on - strand at 64.474 kb on - strand, within GFF4824 at 64.494 kb on + strand, within GFF4824 at 64.494 kb on + strand, within GFF4824 at 64.495 kb on - strand, within GFF4824 at 64.495 kb on - strand, within GFF4824 at 64.507 kb on + strand, within GFF4824 at 64.508 kb on - strand, within GFF4824 at 64.508 kb on - strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.667 kb on - strand, within GFF4824 at 64.741 kb on - strand, within GFF4824 at 64.741 kb on - strand, within GFF4824 at 64.741 kb on - strand, within GFF4824 at 64.799 kb on + strand, within GFF4824 at 64.968 kb on + strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.974 kb on + strand at 64.974 kb on + strand at 65.019 kb on - strand at 65.019 kb on - strand at 65.102 kb on + strand at 65.102 kb on + strand at 65.103 kb on - strand at 65.103 kb on - strand at 65.192 kb on + strand at 65.192 kb on + strand at 65.192 kb on + strand at 65.221 kb on + strand at 65.221 kb on + strand at 65.221 kb on + strand at 65.221 kb on + strand at 65.222 kb on - strand at 65.222 kb on - strand at 65.243 kb on + strand at 65.285 kb on + strand at 65.286 kb on - strand at 65.286 kb on - strand at 65.286 kb on - strand at 65.286 kb on - strand at 65.517 kb on + strand at 65.517 kb on + strand at 65.517 kb on + strand at 65.517 kb on + strand at 65.547 kb on + strand at 65.547 kb on + strand at 65.547 kb on + strand at 65.547 kb on + strand at 65.547 kb on + strand at 65.548 kb on - strand at 65.548 kb on - strand at 65.580 kb on + strand at 65.580 kb on + strand at 65.580 kb on + strand at 65.580 kb on + strand at 65.580 kb on + strand at 65.581 kb on - strand at 65.581 kb on - strand at 65.581 kb on - strand at 65.581 kb on - strand at 65.581 kb on - strand at 65.582 kb on + strand at 65.582 kb on + strand at 65.583 kb on - strand at 65.583 kb on - strand at 65.583 kb on - strand at 65.583 kb on - strand at 65.583 kb on - strand at 65.612 kb on + strand at 65.705 kb on - strand at 65.741 kb on + strand at 65.844 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 63,492 + +0.4 63,492 + -0.2 63,493 - +1.4 63,528 - +0.6 63,555 + +0.8 63,555 + -0.5 63,556 - -0.3 63,556 - -0.1 63,639 + GFF4823 0.16 -0.8 63,639 + GFF4823 0.16 +0.4 63,639 + GFF4823 0.16 -0.8 63,639 + GFF4823 0.16 -0.6 63,639 + GFF4823 0.16 -0.3 63,639 + GFF4823 0.16 +0.1 63,640 - GFF4823 0.16 +0.2 63,640 - GFF4823 0.16 +0.5 63,640 - GFF4823 0.16 +0.3 63,640 - GFF4823 0.16 +0.0 63,640 - GFF4823 0.16 +1.3 63,644 - GFF4823 0.16 -0.3 63,762 + GFF4823 0.29 -0.0 63,762 + GFF4823 0.29 -0.4 63,763 - GFF4823 0.29 -0.4 63,819 + GFF4823 0.35 +0.4 63,819 + GFF4823 0.35 -0.2 63,819 + GFF4823 0.35 -0.8 63,820 - GFF4823 0.35 +0.5 63,873 + GFF4823 0.41 +0.2 63,873 + GFF4823 0.41 +0.2 63,873 + GFF4823 0.41 -0.9 63,874 - GFF4823 0.41 -0.0 63,874 - GFF4823 0.41 +1.4 63,874 - GFF4823 0.41 -0.2 63,874 - GFF4823 0.41 -0.2 63,874 - GFF4823 0.41 +1.7 63,874 - GFF4823 0.41 -1.1 63,874 - GFF4823 0.41 -0.8 63,874 - GFF4823 0.41 +0.0 63,918 + GFF4823 0.46 +0.3 63,969 + GFF4823 0.51 +0.7 63,970 - GFF4823 0.51 +1.3 64,024 + GFF4823 0.57 -0.4 64,025 - GFF4823 0.57 -0.3 64,042 + GFF4823 0.59 -1.9 64,043 - GFF4823 0.59 -0.6 64,068 + GFF4823 0.62 +0.5 64,068 + GFF4823 0.62 +1.3 64,068 + GFF4823 0.62 -0.5 64,068 + GFF4823 0.62 +0.2 64,068 + GFF4823 0.62 -0.0 64,069 - GFF4823 0.62 +0.4 64,160 - GFF4823 0.72 -0.5 64,160 - GFF4823 0.72 +1.1 64,257 + GFF4823 0.82 +0.5 64,258 - GFF4823 0.82 -0.5 64,258 - GFF4823 0.82 +0.6 64,287 + GFF4823 0.85 -1.3 64,287 + GFF4823 0.85 -0.0 64,339 - +0.4 64,360 - -0.3 64,360 - +0.5 64,426 - +0.4 64,426 - +0.2 64,426 - +1.2 64,449 + -0.5 64,449 + -0.1 64,449 + +0.2 64,449 + -0.9 64,449 + -1.4 64,450 - -0.8 64,450 - -0.6 64,474 - GFF4824 0.10 -0.0 64,494 + GFF4824 0.14 +0.7 64,494 + GFF4824 0.14 -1.2 64,495 - GFF4824 0.14 +0.2 64,495 - GFF4824 0.14 +0.6 64,507 + GFF4824 0.17 +0.8 64,508 - GFF4824 0.17 -0.6 64,508 - GFF4824 0.17 -0.0 64,653 + GFF4824 0.46 +1.0 64,653 + GFF4824 0.46 +0.2 64,653 + GFF4824 0.46 +0.6 64,653 + GFF4824 0.46 -0.8 64,653 + GFF4824 0.46 +0.3 64,653 + GFF4824 0.46 +0.1 64,654 - GFF4824 0.46 +2.2 64,654 - GFF4824 0.46 +0.3 64,654 - GFF4824 0.46 -0.5 64,654 - GFF4824 0.46 +0.4 64,654 - GFF4824 0.46 +0.7 64,654 - GFF4824 0.46 +0.0 64,654 - GFF4824 0.46 +0.2 64,667 - GFF4824 0.49 -0.4 64,741 - GFF4824 0.63 +0.4 64,741 - GFF4824 0.63 +0.2 64,741 - GFF4824 0.63 +0.8 64,799 + GFF4824 0.75 +0.1 64,968 + -0.6 64,969 - +0.0 64,969 - +1.3 64,969 - -1.3 64,969 - +0.3 64,969 - -0.1 64,974 + -0.3 64,974 + -0.7 65,019 - +0.7 65,019 - -0.1 65,102 + -0.4 65,102 + +0.3 65,103 - -1.2 65,103 - +0.8 65,192 + -1.5 65,192 + -0.2 65,192 + -0.0 65,221 + +0.1 65,221 + -0.9 65,221 + +0.2 65,221 + +0.6 65,222 - -0.2 65,222 - -0.1 65,243 + +0.6 65,285 + +0.2 65,286 - +0.8 65,286 - +0.0 65,286 - -0.0 65,286 - -0.0 65,517 + +0.2 65,517 + +0.0 65,517 + -1.1 65,517 + -0.9 65,547 + -0.6 65,547 + +0.0 65,547 + -0.7 65,547 + +1.0 65,547 + +1.0 65,548 - -1.5 65,548 - +0.9 65,580 + +0.4 65,580 + -0.5 65,580 + -0.4 65,580 + -0.2 65,580 + -1.0 65,581 - +0.2 65,581 - +1.5 65,581 - -0.1 65,581 - -0.4 65,581 - -0.1 65,582 + +1.9 65,582 + +0.4 65,583 - +0.3 65,583 - +0.1 65,583 - -1.9 65,583 - -0.3 65,583 - -0.6 65,612 + +1.3 65,705 - -0.7 65,741 + +0.5 65,844 + -0.0
Or see this region's nucleotide sequence