Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4759 and GFF4760 are separated by 151 nucleotides GFF4760 and GFF4761 are separated by 161 nucleotides
GFF4759 - HTH-type transcriptional regulator HdfR, at 172,274 to 173,221
GFF4759
GFF4760 - hypothetical protein, at 173,373 to 174,359
GFF4760
GFF4761 - hypothetical protein, at 174,521 to 175,576
GFF4761
Position (kb) 173
174
175 Strain fitness (log2 ratio) -2
-1
0
1 at 172.893 kb on - strand, within GFF4759 at 172.991 kb on + strand, within GFF4759 at 172.992 kb on - strand, within GFF4759 at 173.304 kb on + strand at 173.305 kb on - strand at 173.309 kb on + strand at 173.309 kb on + strand at 173.310 kb on - strand at 173.539 kb on - strand, within GFF4760 at 173.539 kb on - strand, within GFF4760 at 173.604 kb on + strand, within GFF4760 at 173.604 kb on + strand, within GFF4760 at 173.605 kb on - strand, within GFF4760 at 173.605 kb on - strand, within GFF4760 at 173.605 kb on - strand, within GFF4760 at 173.643 kb on + strand, within GFF4760 at 173.644 kb on - strand, within GFF4760 at 173.644 kb on - strand, within GFF4760 at 173.731 kb on - strand, within GFF4760 at 173.919 kb on + strand, within GFF4760 at 173.919 kb on + strand, within GFF4760 at 173.919 kb on + strand, within GFF4760 at 173.943 kb on + strand, within GFF4760 at 173.943 kb on + strand, within GFF4760 at 173.944 kb on - strand, within GFF4760 at 173.944 kb on - strand, within GFF4760 at 174.367 kb on - strand at 174.367 kb on - strand at 174.388 kb on - strand at 174.423 kb on + strand at 174.476 kb on + strand at 174.477 kb on - strand at 174.477 kb on - strand at 174.477 kb on - strand at 174.520 kb on + strand at 174.520 kb on + strand at 174.521 kb on - strand at 174.521 kb on - strand at 174.587 kb on - strand at 174.671 kb on + strand, within GFF4761 at 174.671 kb on + strand, within GFF4761 at 174.672 kb on - strand, within GFF4761 at 174.672 kb on - strand, within GFF4761 at 174.698 kb on + strand, within GFF4761 at 174.699 kb on - strand, within GFF4761 at 174.765 kb on - strand, within GFF4761 at 174.846 kb on - strand, within GFF4761 at 174.846 kb on - strand, within GFF4761 at 175.230 kb on - strand, within GFF4761 at 175.230 kb on - strand, within GFF4761
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 172,893 - GFF4759 0.65 +1.3 172,991 + GFF4759 0.76 -0.5 172,992 - GFF4759 0.76 +0.4 173,304 + -1.1 173,305 - -0.4 173,309 + +0.8 173,309 + +0.3 173,310 - +0.1 173,539 - GFF4760 0.17 -2.7 173,539 - GFF4760 0.17 +0.5 173,604 + GFF4760 0.23 +0.7 173,604 + GFF4760 0.23 -2.4 173,605 - GFF4760 0.24 -0.0 173,605 - GFF4760 0.24 -0.4 173,605 - GFF4760 0.24 +0.4 173,643 + GFF4760 0.27 +0.4 173,644 - GFF4760 0.27 -0.7 173,644 - GFF4760 0.27 +0.7 173,731 - GFF4760 0.36 -0.7 173,919 + GFF4760 0.55 -0.8 173,919 + GFF4760 0.55 -0.3 173,919 + GFF4760 0.55 -0.4 173,943 + GFF4760 0.58 +0.7 173,943 + GFF4760 0.58 -0.4 173,944 - GFF4760 0.58 +0.7 173,944 - GFF4760 0.58 -1.2 174,367 - -0.3 174,367 - -0.9 174,388 - +0.4 174,423 + -0.3 174,476 + -0.8 174,477 - -0.1 174,477 - -0.5 174,477 - -0.3 174,520 + -0.3 174,520 + -2.1 174,521 - -0.5 174,521 - -0.1 174,587 - +0.7 174,671 + GFF4761 0.14 -0.1 174,671 + GFF4761 0.14 -0.4 174,672 - GFF4761 0.14 +0.1 174,672 - GFF4761 0.14 -0.0 174,698 + GFF4761 0.17 +0.5 174,699 - GFF4761 0.17 -0.4 174,765 - GFF4761 0.23 +0.0 174,846 - GFF4761 0.31 -0.7 174,846 - GFF4761 0.31 +0.6 175,230 - GFF4761 0.67 -0.4 175,230 - GFF4761 0.67 +0.8
Or see this region's nucleotide sequence