Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4712 and GFF4713 are separated by 27 nucleotides GFF4713 and GFF4714 are separated by 292 nucleotides GFF4714 and GFF4715 are separated by 146 nucleotides
GFF4712 - hypothetical protein, at 125,214 to 125,672
GFF4712
GFF4713 - hypothetical protein, at 125,700 to 126,059
GFF4713
GFF4714 - Transaldolase, at 126,352 to 127,101
GFF4714
GFF4715 - Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 127,248 to 128,468
GFF4715
Position (kb) 126
127
128 Strain fitness (log2 ratio) -1
0
1 at 125.671 kb on - strand at 126.317 kb on - strand at 126.319 kb on - strand at 126.319 kb on - strand at 126.319 kb on - strand at 126.496 kb on + strand, within GFF4714 at 126.543 kb on + strand, within GFF4714 at 126.544 kb on - strand, within GFF4714 at 126.667 kb on + strand, within GFF4714 at 126.667 kb on + strand, within GFF4714 at 126.667 kb on + strand, within GFF4714 at 126.826 kb on + strand, within GFF4714 at 126.827 kb on - strand, within GFF4714 at 126.933 kb on + strand, within GFF4714 at 127.107 kb on - strand at 127.107 kb on - strand at 127.107 kb on - strand at 127.107 kb on - strand at 127.107 kb on - strand at 127.165 kb on + strand at 127.165 kb on + strand at 127.452 kb on + strand, within GFF4715 at 127.452 kb on + strand, within GFF4715
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 125,671 - -0.5 126,317 - +0.4 126,319 - -0.2 126,319 - -0.2 126,319 - +0.2 126,496 + GFF4714 0.19 +0.4 126,543 + GFF4714 0.25 -0.2 126,544 - GFF4714 0.26 +1.0 126,667 + GFF4714 0.42 -0.1 126,667 + GFF4714 0.42 +0.8 126,667 + GFF4714 0.42 -0.5 126,826 + GFF4714 0.63 +0.2 126,827 - GFF4714 0.63 -0.1 126,933 + GFF4714 0.77 -0.4 127,107 - -1.0 127,107 - +0.1 127,107 - +0.2 127,107 - -0.8 127,107 - -0.3 127,165 + -0.3 127,165 + +0.3 127,452 + GFF4715 0.17 +0.5 127,452 + GFF4715 0.17 -1.1
Or see this region's nucleotide sequence