Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4527 and GFF4528 are separated by 426 nucleotides GFF4528 and GFF4529 are separated by 100 nucleotides GFF4529 and GFF4530 are separated by 70 nucleotides
GFF4527 - Adaptive-response sensory-kinase SasA, at 101,303 to 103,384
GFF4527
GFF4528 - hypothetical protein, at 103,811 to 104,179
GFF4528
GFF4529 - Maleylpyruvate isomerase, at 104,280 to 104,915
GFF4529
GFF4530 - hypothetical protein, at 104,986 to 105,594
GFF4530
Position (kb) 103
104
105 Strain fitness (log2 ratio) -2
-1
0
1 at 103.844 kb on + strand at 103.844 kb on + strand at 103.845 kb on - strand at 103.857 kb on - strand, within GFF4528 at 103.920 kb on - strand, within GFF4528 at 104.006 kb on + strand, within GFF4528 at 104.289 kb on + strand at 104.316 kb on + strand at 104.490 kb on + strand, within GFF4529 at 104.491 kb on - strand, within GFF4529 at 104.491 kb on - strand, within GFF4529 at 104.491 kb on - strand, within GFF4529 at 104.491 kb on - strand, within GFF4529 at 104.491 kb on - strand, within GFF4529 at 104.550 kb on + strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.551 kb on - strand, within GFF4529 at 104.664 kb on + strand, within GFF4529 at 104.848 kb on - strand, within GFF4529 at 104.848 kb on - strand, within GFF4529 at 104.895 kb on + strand at 104.895 kb on + strand at 104.896 kb on - strand at 104.896 kb on - strand at 104.939 kb on + strand at 105.151 kb on + strand, within GFF4530 at 105.151 kb on + strand, within GFF4530 at 105.151 kb on + strand, within GFF4530 at 105.152 kb on - strand, within GFF4530 at 105.152 kb on - strand, within GFF4530 at 105.152 kb on - strand, within GFF4530
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 103,844 + +0.2 103,844 + -2.3 103,845 - -0.1 103,857 - GFF4528 0.12 +0.8 103,920 - GFF4528 0.30 -0.8 104,006 + GFF4528 0.53 +1.7 104,289 + +0.4 104,316 + +0.5 104,490 + GFF4529 0.33 +0.3 104,491 - GFF4529 0.33 +0.1 104,491 - GFF4529 0.33 +0.4 104,491 - GFF4529 0.33 +0.2 104,491 - GFF4529 0.33 +1.0 104,491 - GFF4529 0.33 -0.4 104,550 + GFF4529 0.42 +0.7 104,551 - GFF4529 0.43 +0.4 104,551 - GFF4529 0.43 +0.3 104,551 - GFF4529 0.43 +0.4 104,551 - GFF4529 0.43 -1.5 104,551 - GFF4529 0.43 -0.5 104,551 - GFF4529 0.43 +0.3 104,551 - GFF4529 0.43 +1.1 104,664 + GFF4529 0.60 +1.4 104,848 - GFF4529 0.89 -0.7 104,848 - GFF4529 0.89 -1.1 104,895 + +0.3 104,895 + +0.3 104,896 - +1.1 104,896 - -0.4 104,939 + -0.7 105,151 + GFF4530 0.27 -0.7 105,151 + GFF4530 0.27 +0.6 105,151 + GFF4530 0.27 +0.5 105,152 - GFF4530 0.27 +1.0 105,152 - GFF4530 0.27 -0.9 105,152 - GFF4530 0.27 -0.5
Or see this region's nucleotide sequence