Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF444 and GFF445 are separated by 90 nucleotides GFF445 and GFF446 are separated by 279 nucleotides
GFF444 - Ethanolamine ammonia-lyase heavy chain, at 467,204 to 468,592
GFF444
GFF445 - Glutamate/aspartate import solute-binding protein, at 468,683 to 469,582
GFF445
GFF446 - hypothetical protein, at 469,862 to 470,860
GFF446
Position (kb) 468
469
470 Strain fitness (log2 ratio) -2
-1
0
1 at 467.737 kb on - strand, within GFF444 at 468.045 kb on + strand, within GFF444 at 468.045 kb on + strand, within GFF444 at 468.394 kb on - strand, within GFF444 at 468.644 kb on - strand at 468.650 kb on - strand at 468.650 kb on - strand at 468.660 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.855 kb on + strand, within GFF445 at 468.855 kb on + strand, within GFF445 at 468.924 kb on + strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.951 kb on + strand, within GFF445 at 469.284 kb on + strand, within GFF445 at 469.359 kb on + strand, within GFF445 at 469.389 kb on + strand, within GFF445 at 469.395 kb on + strand, within GFF445 at 469.395 kb on + strand, within GFF445 at 469.396 kb on - strand, within GFF445 at 469.396 kb on - strand, within GFF445 at 470.366 kb on + strand, within GFF446 at 470.366 kb on + strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446 at 470.367 kb on - strand, within GFF446
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 467,737 - GFF444 0.38 -0.4 468,045 + GFF444 0.61 +0.7 468,045 + GFF444 0.61 -2.0 468,394 - GFF444 0.86 -0.3 468,644 - -1.0 468,650 - -0.2 468,650 - -0.5 468,660 + +0.7 468,759 + +0.7 468,759 + +0.6 468,759 + -0.1 468,759 + +1.2 468,759 + +0.2 468,760 - -0.2 468,760 - -0.2 468,760 - -0.4 468,760 - +0.6 468,760 - -1.1 468,760 - -0.6 468,760 - -0.2 468,760 - +0.5 468,855 + GFF445 0.19 -0.0 468,855 + GFF445 0.19 -0.0 468,924 + GFF445 0.27 +0.3 468,925 - GFF445 0.27 +0.5 468,925 - GFF445 0.27 -0.6 468,925 - GFF445 0.27 +0.1 468,951 + GFF445 0.30 -0.2 469,284 + GFF445 0.67 -0.6 469,359 + GFF445 0.75 -0.2 469,389 + GFF445 0.78 +0.4 469,395 + GFF445 0.79 -0.7 469,395 + GFF445 0.79 -1.4 469,396 - GFF445 0.79 +0.0 469,396 - GFF445 0.79 +0.5 470,366 + GFF446 0.50 +0.4 470,366 + GFF446 0.50 -0.2 470,367 - GFF446 0.51 +1.0 470,367 - GFF446 0.51 -1.2 470,367 - GFF446 0.51 -0.1 470,367 - GFF446 0.51 -0.8 470,367 - GFF446 0.51 -0.6 470,367 - GFF446 0.51 +1.1
Or see this region's nucleotide sequence