Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4387 and GFF4388 are separated by 17 nucleotides GFF4388 and GFF4389 are separated by 35 nucleotides
GFF4387 - Steroid C26-monooxygenase, at 187,102 to 188,370
GFF4387
GFF4388 - hypothetical protein, at 188,388 to 189,095
GFF4388
GFF4389 - hypothetical protein, at 189,131 to 190,186
GFF4389
Position (kb) 188
189
190 Strain fitness (log2 ratio) -1
0
1 at 187.402 kb on + strand, within GFF4387 at 187.403 kb on - strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.613 kb on - strand, within GFF4387 at 187.613 kb on - strand, within GFF4387 at 187.993 kb on + strand, within GFF4387 at 187.994 kb on - strand, within GFF4387 at 187.994 kb on - strand, within GFF4387 at 188.059 kb on + strand, within GFF4387 at 188.059 kb on + strand, within GFF4387 at 188.123 kb on + strand, within GFF4387 at 188.124 kb on - strand, within GFF4387 at 188.124 kb on - strand, within GFF4387 at 188.200 kb on + strand, within GFF4387 at 188.200 kb on + strand, within GFF4387 at 188.200 kb on + strand, within GFF4387 at 188.351 kb on - strand at 188.377 kb on - strand at 188.514 kb on + strand, within GFF4388 at 188.571 kb on + strand, within GFF4388 at 188.572 kb on - strand, within GFF4388 at 188.760 kb on + strand, within GFF4388 at 188.760 kb on + strand, within GFF4388 at 188.760 kb on + strand, within GFF4388 at 188.761 kb on - strand, within GFF4388 at 188.761 kb on - strand, within GFF4388 at 188.761 kb on - strand, within GFF4388 at 188.880 kb on + strand, within GFF4388 at 189.093 kb on + strand at 189.093 kb on + strand at 189.094 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 187,402 + GFF4387 0.24 +0.1 187,403 - GFF4387 0.24 +0.7 187,612 + GFF4387 0.40 +0.0 187,612 + GFF4387 0.40 +0.0 187,612 + GFF4387 0.40 -1.4 187,613 - GFF4387 0.40 +0.9 187,613 - GFF4387 0.40 +1.1 187,993 + GFF4387 0.70 +0.7 187,994 - GFF4387 0.70 -0.7 187,994 - GFF4387 0.70 -0.0 188,059 + GFF4387 0.75 -0.3 188,059 + GFF4387 0.75 -0.1 188,123 + GFF4387 0.80 +0.9 188,124 - GFF4387 0.81 -0.6 188,124 - GFF4387 0.81 +0.0 188,200 + GFF4387 0.87 -0.2 188,200 + GFF4387 0.87 -0.2 188,200 + GFF4387 0.87 -0.6 188,351 - -0.7 188,377 - -0.3 188,514 + GFF4388 0.18 +0.0 188,571 + GFF4388 0.26 -0.7 188,572 - GFF4388 0.26 -0.4 188,760 + GFF4388 0.53 -0.6 188,760 + GFF4388 0.53 +0.1 188,760 + GFF4388 0.53 -0.6 188,761 - GFF4388 0.53 -0.2 188,761 - GFF4388 0.53 -0.2 188,761 - GFF4388 0.53 -0.5 188,880 + GFF4388 0.69 -0.4 189,093 + -0.4 189,093 + -0.4 189,094 - +0.6
Or see this region's nucleotide sequence