Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4293 and GFF4294 are separated by 31 nucleotides GFF4294 and GFF4295 are separated by 88 nucleotides GFF4295 and GFF4296 are separated by 10 nucleotides
GFF4293 - hypothetical protein, at 73,288 to 74,481
GFF4293
GFF4294 - hypothetical protein, at 74,513 to 75,925
GFF4294
GFF4295 - Bicarbonate transport ATP-binding protein CmpD, at 76,014 to 76,838
GFF4295
GFF4296 - Riboflavin transport system permease protein RibX, at 76,849 to 77,658
GFF4296
Position (kb) 74
75
76 Strain fitness (log2 ratio) -2
-1
0
1 at 73.646 kb on + strand, within GFF4293 at 73.680 kb on - strand, within GFF4293 at 73.699 kb on - strand, within GFF4293 at 73.700 kb on + strand, within GFF4293 at 73.700 kb on + strand, within GFF4293 at 73.701 kb on - strand, within GFF4293 at 73.791 kb on + strand, within GFF4293 at 73.935 kb on - strand, within GFF4293 at 73.935 kb on - strand, within GFF4293 at 73.935 kb on - strand, within GFF4293 at 73.946 kb on + strand, within GFF4293 at 73.946 kb on + strand, within GFF4293 at 73.946 kb on + strand, within GFF4293 at 73.947 kb on - strand, within GFF4293 at 74.042 kb on + strand, within GFF4293 at 74.042 kb on + strand, within GFF4293 at 74.043 kb on - strand, within GFF4293 at 74.570 kb on - strand at 74.570 kb on - strand at 74.685 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.929 kb on - strand, within GFF4294 at 74.929 kb on - strand, within GFF4294 at 74.929 kb on - strand, within GFF4294 at 75.093 kb on + strand, within GFF4294 at 75.094 kb on - strand, within GFF4294 at 75.171 kb on + strand, within GFF4294 at 75.172 kb on - strand, within GFF4294 at 75.202 kb on - strand, within GFF4294 at 75.657 kb on + strand, within GFF4294 at 76.119 kb on + strand, within GFF4295 at 76.120 kb on - strand, within GFF4295 at 76.120 kb on - strand, within GFF4295 at 76.120 kb on - strand, within GFF4295 at 76.126 kb on + strand, within GFF4295 at 76.126 kb on + strand, within GFF4295 at 76.127 kb on - strand, within GFF4295 at 76.237 kb on + strand, within GFF4295 at 76.238 kb on - strand, within GFF4295 at 76.390 kb on + strand, within GFF4295 at 76.390 kb on + strand, within GFF4295 at 76.745 kb on - strand, within GFF4295 at 76.745 kb on - strand, within GFF4295
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 73,646 + GFF4293 0.30 +0.0 73,680 - GFF4293 0.33 -0.5 73,699 - GFF4293 0.34 -0.2 73,700 + GFF4293 0.35 -0.3 73,700 + GFF4293 0.35 -2.1 73,701 - GFF4293 0.35 +0.4 73,791 + GFF4293 0.42 +0.2 73,935 - GFF4293 0.54 -0.2 73,935 - GFF4293 0.54 -0.1 73,935 - GFF4293 0.54 -0.6 73,946 + GFF4293 0.55 +0.0 73,946 + GFF4293 0.55 +0.8 73,946 + GFF4293 0.55 -0.3 73,947 - GFF4293 0.55 -0.7 74,042 + GFF4293 0.63 +0.2 74,042 + GFF4293 0.63 -0.6 74,043 - GFF4293 0.63 -1.9 74,570 - -0.9 74,570 - -0.4 74,685 + GFF4294 0.12 -0.2 74,754 + GFF4294 0.17 -1.2 74,754 + GFF4294 0.17 -0.7 74,754 + GFF4294 0.17 -0.6 74,754 + GFF4294 0.17 -0.3 74,755 - GFF4294 0.17 -0.6 74,755 - GFF4294 0.17 -0.6 74,755 - GFF4294 0.17 -0.8 74,755 - GFF4294 0.17 +0.6 74,755 - GFF4294 0.17 -0.7 74,929 - GFF4294 0.29 +0.2 74,929 - GFF4294 0.29 +0.7 74,929 - GFF4294 0.29 -0.2 75,093 + GFF4294 0.41 -1.4 75,094 - GFF4294 0.41 -0.7 75,171 + GFF4294 0.47 -0.0 75,172 - GFF4294 0.47 +0.8 75,202 - GFF4294 0.49 +0.1 75,657 + GFF4294 0.81 +1.6 76,119 + GFF4295 0.13 -1.0 76,120 - GFF4295 0.13 -1.6 76,120 - GFF4295 0.13 +1.1 76,120 - GFF4295 0.13 -0.3 76,126 + GFF4295 0.14 +0.2 76,126 + GFF4295 0.14 -0.3 76,127 - GFF4295 0.14 -1.0 76,237 + GFF4295 0.27 -0.3 76,238 - GFF4295 0.27 +0.7 76,390 + GFF4295 0.46 -0.3 76,390 + GFF4295 0.46 +0.4 76,745 - GFF4295 0.89 -0.6 76,745 - GFF4295 0.89 +0.6
Or see this region's nucleotide sequence