Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4283 and GFF4284 are separated by 599 nucleotides GFF4284 and GFF4285 are separated by 57 nucleotides
GFF4283 - hypothetical protein, at 55,705 to 63,177
GFF4283
GFF4284 - HTH-type transcriptional activator RhaS, at 63,777 to 64,556
GFF4284
GFF4285 - Glutathione-specific gamma-glutamylcyclotransferase, at 64,614 to 65,303
GFF4285
Position (kb) 63
64
65 Strain fitness (log2 ratio) -1
0
1 at 62.796 kb on - strand at 62.802 kb on + strand at 62.802 kb on + strand at 63.109 kb on + strand at 63.110 kb on - strand at 63.526 kb on - strand at 63.755 kb on + strand at 63.755 kb on + strand at 63.799 kb on + strand at 63.799 kb on + strand at 63.799 kb on + strand at 63.901 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.065 kb on + strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.066 kb on - strand, within GFF4284 at 64.234 kb on - strand, within GFF4284 at 64.260 kb on + strand, within GFF4284 at 64.461 kb on + strand, within GFF4284 at 64.726 kb on + strand, within GFF4285 at 64.804 kb on + strand, within GFF4285 at 64.804 kb on + strand, within GFF4285 at 64.805 kb on - strand, within GFF4285 at 64.894 kb on + strand, within GFF4285 at 64.895 kb on - strand, within GFF4285 at 64.895 kb on - strand, within GFF4285 at 65.137 kb on + strand, within GFF4285 at 65.314 kb on - strand at 65.318 kb on - strand at 65.397 kb on + strand at 65.397 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 62,796 - -0.9 62,802 + -0.3 62,802 + +0.0 63,109 + -0.5 63,110 - +0.8 63,526 - -1.1 63,755 + -0.1 63,755 + +0.0 63,799 + -0.7 63,799 + +1.0 63,799 + +0.3 63,901 + GFF4284 0.16 +1.0 64,065 + GFF4284 0.37 +0.4 64,065 + GFF4284 0.37 -0.1 64,065 + GFF4284 0.37 -0.4 64,065 + GFF4284 0.37 +0.2 64,066 - GFF4284 0.37 -0.1 64,066 - GFF4284 0.37 -0.9 64,066 - GFF4284 0.37 +0.7 64,066 - GFF4284 0.37 +1.3 64,234 - GFF4284 0.59 +0.9 64,260 + GFF4284 0.62 -0.5 64,461 + GFF4284 0.88 -0.7 64,726 + GFF4285 0.16 -1.0 64,804 + GFF4285 0.28 -0.9 64,804 + GFF4285 0.28 -0.9 64,805 - GFF4285 0.28 -0.5 64,894 + GFF4285 0.41 -0.3 64,895 - GFF4285 0.41 -0.1 64,895 - GFF4285 0.41 +0.0 65,137 + GFF4285 0.76 +1.4 65,314 - +1.2 65,318 - -0.4 65,397 + +1.0 65,397 + -0.1
Or see this region's nucleotide sequence