Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4203 and GFF4204 overlap by 4 nucleotides GFF4204 and GFF4205 are separated by 523 nucleotides
GFF4203 - Penicillin-binding protein 1C, at 222,131 to 224,215
GFF4203
GFF4204 - Alpha-2-macroglobulin, at 224,212 to 229,542
GFF4204
GFF4205 - hypothetical protein, at 230,066 to 231,127
GFF4205
Position (kb) 224
225
226
227
228
229
230 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 223.224 kb on + strand, within GFF4203 at 223.224 kb on + strand, within GFF4203 at 223.224 kb on + strand, within GFF4203 at 223.225 kb on - strand, within GFF4203 at 223.225 kb on - strand, within GFF4203 at 223.225 kb on - strand, within GFF4203 at 223.695 kb on + strand, within GFF4203 at 223.903 kb on + strand, within GFF4203 at 223.904 kb on - strand, within GFF4203 at 223.904 kb on - strand, within GFF4203 at 223.904 kb on - strand, within GFF4203 at 223.904 kb on - strand, within GFF4203 at 223.929 kb on + strand, within GFF4203 at 223.930 kb on - strand, within GFF4203 at 223.930 kb on - strand, within GFF4203 at 224.273 kb on + strand at 224.274 kb on - strand at 224.274 kb on - strand at 224.307 kb on - strand at 224.307 kb on - strand at 224.624 kb on + strand at 225.171 kb on - strand, within GFF4204 at 225.215 kb on + strand, within GFF4204 at 225.215 kb on + strand, within GFF4204 at 225.216 kb on - strand, within GFF4204 at 225.216 kb on - strand, within GFF4204 at 225.224 kb on + strand, within GFF4204 at 225.225 kb on - strand, within GFF4204 at 225.225 kb on - strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.365 kb on + strand, within GFF4204 at 225.366 kb on - strand, within GFF4204 at 225.366 kb on - strand, within GFF4204 at 225.518 kb on + strand, within GFF4204 at 225.566 kb on + strand, within GFF4204 at 225.566 kb on + strand, within GFF4204 at 225.567 kb on - strand, within GFF4204 at 225.740 kb on + strand, within GFF4204 at 226.096 kb on - strand, within GFF4204 at 226.299 kb on - strand, within GFF4204 at 226.415 kb on + strand, within GFF4204 at 226.415 kb on + strand, within GFF4204 at 226.415 kb on + strand, within GFF4204 at 226.415 kb on + strand, within GFF4204 at 226.415 kb on + strand, within GFF4204 at 226.416 kb on - strand, within GFF4204 at 226.416 kb on - strand, within GFF4204 at 226.416 kb on - strand, within GFF4204 at 226.416 kb on - strand, within GFF4204 at 226.416 kb on - strand, within GFF4204 at 226.616 kb on + strand, within GFF4204 at 226.616 kb on + strand, within GFF4204 at 226.781 kb on + strand, within GFF4204 at 226.781 kb on + strand, within GFF4204 at 226.913 kb on + strand, within GFF4204 at 226.914 kb on - strand, within GFF4204 at 227.037 kb on - strand, within GFF4204 at 227.399 kb on + strand, within GFF4204 at 227.399 kb on + strand, within GFF4204 at 227.576 kb on + strand, within GFF4204 at 227.577 kb on - strand, within GFF4204 at 227.688 kb on + strand, within GFF4204 at 227.841 kb on - strand, within GFF4204 at 227.930 kb on + strand, within GFF4204 at 228.221 kb on + strand, within GFF4204 at 228.222 kb on - strand, within GFF4204 at 228.266 kb on + strand, within GFF4204 at 228.404 kb on + strand, within GFF4204 at 228.404 kb on + strand, within GFF4204 at 228.404 kb on + strand, within GFF4204 at 228.404 kb on + strand, within GFF4204 at 228.405 kb on - strand, within GFF4204 at 228.548 kb on + strand, within GFF4204 at 228.548 kb on + strand, within GFF4204 at 228.548 kb on + strand, within GFF4204 at 228.548 kb on + strand, within GFF4204 at 228.549 kb on - strand, within GFF4204 at 228.549 kb on - strand, within GFF4204 at 228.549 kb on - strand, within GFF4204 at 228.549 kb on - strand, within GFF4204 at 228.549 kb on - strand, within GFF4204 at 228.549 kb on - strand, within GFF4204 at 228.593 kb on + strand, within GFF4204 at 228.593 kb on + strand, within GFF4204 at 228.593 kb on + strand, within GFF4204 at 228.593 kb on + strand, within GFF4204 at 228.593 kb on + strand, within GFF4204 at 228.594 kb on - strand, within GFF4204 at 228.594 kb on - strand, within GFF4204 at 228.594 kb on - strand, within GFF4204 at 228.594 kb on - strand, within GFF4204 at 228.594 kb on - strand, within GFF4204 at 228.594 kb on - strand, within GFF4204 at 228.668 kb on + strand, within GFF4204 at 228.839 kb on + strand, within GFF4204 at 228.968 kb on + strand, within GFF4204 at 228.968 kb on + strand, within GFF4204 at 228.969 kb on - strand, within GFF4204 at 228.972 kb on + strand, within GFF4204 at 228.972 kb on + strand, within GFF4204 at 228.972 kb on + strand, within GFF4204 at 228.972 kb on + strand, within GFF4204 at 228.972 kb on + strand, within GFF4204 at 228.972 kb on + strand, within GFF4204 at 228.973 kb on - strand, within GFF4204 at 228.973 kb on - strand, within GFF4204 at 228.973 kb on - strand, within GFF4204 at 228.973 kb on - strand, within GFF4204 at 229.170 kb on - strand at 229.283 kb on + strand at 229.610 kb on - strand at 229.723 kb on - strand at 229.773 kb on - strand at 229.773 kb on - strand at 230.296 kb on - strand, within GFF4205 at 230.335 kb on + strand, within GFF4205 at 230.336 kb on - strand, within GFF4205
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 223,224 + GFF4203 0.52 +3.7 223,224 + GFF4203 0.52 +3.5 223,224 + GFF4203 0.52 +3.5 223,225 - GFF4203 0.52 +3.1 223,225 - GFF4203 0.52 +3.3 223,225 - GFF4203 0.52 +3.0 223,695 + GFF4203 0.75 +3.6 223,903 + GFF4203 0.85 +3.7 223,904 - GFF4203 0.85 +3.1 223,904 - GFF4203 0.85 +4.1 223,904 - GFF4203 0.85 +4.2 223,904 - GFF4203 0.85 +3.6 223,929 + GFF4203 0.86 +3.6 223,930 - GFF4203 0.86 +4.3 223,930 - GFF4203 0.86 +3.1 224,273 + +3.9 224,274 - +3.8 224,274 - +2.8 224,307 - +3.5 224,307 - +3.4 224,624 + +4.4 225,171 - GFF4204 0.18 +3.2 225,215 + GFF4204 0.19 +3.7 225,215 + GFF4204 0.19 +3.8 225,216 - GFF4204 0.19 +3.8 225,216 - GFF4204 0.19 +4.7 225,224 + GFF4204 0.19 +3.8 225,225 - GFF4204 0.19 +3.5 225,225 - GFF4204 0.19 +3.7 225,365 + GFF4204 0.22 +3.7 225,365 + GFF4204 0.22 +3.7 225,365 + GFF4204 0.22 +4.3 225,365 + GFF4204 0.22 +4.3 225,365 + GFF4204 0.22 +3.4 225,365 + GFF4204 0.22 +3.9 225,365 + GFF4204 0.22 +3.6 225,365 + GFF4204 0.22 +4.1 225,365 + GFF4204 0.22 +3.7 225,365 + GFF4204 0.22 +4.1 225,366 - GFF4204 0.22 +3.6 225,366 - GFF4204 0.22 +3.7 225,518 + GFF4204 0.24 +4.0 225,566 + GFF4204 0.25 +3.5 225,566 + GFF4204 0.25 +4.0 225,567 - GFF4204 0.25 +3.7 225,740 + GFF4204 0.29 +3.5 226,096 - GFF4204 0.35 +3.5 226,299 - GFF4204 0.39 +4.0 226,415 + GFF4204 0.41 +3.4 226,415 + GFF4204 0.41 +3.3 226,415 + GFF4204 0.41 +4.5 226,415 + GFF4204 0.41 +2.8 226,415 + GFF4204 0.41 +3.7 226,416 - GFF4204 0.41 +3.3 226,416 - GFF4204 0.41 +3.8 226,416 - GFF4204 0.41 +4.1 226,416 - GFF4204 0.41 +3.9 226,416 - GFF4204 0.41 +4.5 226,616 + GFF4204 0.45 +4.2 226,616 + GFF4204 0.45 +3.9 226,781 + GFF4204 0.48 +3.5 226,781 + GFF4204 0.48 +3.4 226,913 + GFF4204 0.51 +4.4 226,914 - GFF4204 0.51 +3.4 227,037 - GFF4204 0.53 +4.1 227,399 + GFF4204 0.60 +4.5 227,399 + GFF4204 0.60 +3.5 227,576 + GFF4204 0.63 +3.8 227,577 - GFF4204 0.63 +3.8 227,688 + GFF4204 0.65 +3.0 227,841 - GFF4204 0.68 +3.9 227,930 + GFF4204 0.70 +4.1 228,221 + GFF4204 0.75 +3.7 228,222 - GFF4204 0.75 +4.1 228,266 + GFF4204 0.76 +3.6 228,404 + GFF4204 0.79 +4.5 228,404 + GFF4204 0.79 +3.4 228,404 + GFF4204 0.79 +3.7 228,404 + GFF4204 0.79 +4.5 228,405 - GFF4204 0.79 +3.9 228,548 + GFF4204 0.81 +3.2 228,548 + GFF4204 0.81 +3.1 228,548 + GFF4204 0.81 +4.2 228,548 + GFF4204 0.81 +3.2 228,549 - GFF4204 0.81 +3.7 228,549 - GFF4204 0.81 +3.8 228,549 - GFF4204 0.81 +4.9 228,549 - GFF4204 0.81 +3.8 228,549 - GFF4204 0.81 +4.4 228,549 - GFF4204 0.81 +3.2 228,593 + GFF4204 0.82 +3.5 228,593 + GFF4204 0.82 +3.8 228,593 + GFF4204 0.82 +4.9 228,593 + GFF4204 0.82 +3.6 228,593 + GFF4204 0.82 +4.1 228,594 - GFF4204 0.82 +2.6 228,594 - GFF4204 0.82 +3.7 228,594 - GFF4204 0.82 +2.9 228,594 - GFF4204 0.82 +3.6 228,594 - GFF4204 0.82 +3.5 228,594 - GFF4204 0.82 +3.0 228,668 + GFF4204 0.84 +3.6 228,839 + GFF4204 0.87 +4.1 228,968 + GFF4204 0.89 +4.5 228,968 + GFF4204 0.89 +3.4 228,969 - GFF4204 0.89 +3.9 228,972 + GFF4204 0.89 +4.4 228,972 + GFF4204 0.89 +3.2 228,972 + GFF4204 0.89 +3.7 228,972 + GFF4204 0.89 +4.2 228,972 + GFF4204 0.89 +3.8 228,972 + GFF4204 0.89 +3.4 228,973 - GFF4204 0.89 +3.9 228,973 - GFF4204 0.89 +4.0 228,973 - GFF4204 0.89 +2.7 228,973 - GFF4204 0.89 +3.3 229,170 - +4.1 229,283 + +3.5 229,610 - +1.0 229,723 - +0.8 229,773 - -0.7 229,773 - +1.1 230,296 - GFF4205 0.22 -0.7 230,335 + GFF4205 0.25 +0.7 230,336 - GFF4205 0.25 +0.8
Or see this region's nucleotide sequence