Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF417 and GFF418 are separated by 66 nucleotides GFF418 and GFF419 are separated by 124 nucleotides
GFF417 - 3-mercaptopyruvate sulfurtransferase, at 428,093 to 428,965
GFF417
GFF418 - Cysteine synthase, at 429,032 to 430,060
GFF418
GFF419 - Deoxyribodipyrimidine photo-lyase, at 430,185 to 431,660
GFF419
Position (kb) 429
430
431 Strain fitness (log2 ratio) -1
0
1 at 428.656 kb on - strand, within GFF417 at 428.727 kb on - strand, within GFF417 at 428.808 kb on + strand, within GFF417 at 429.144 kb on + strand, within GFF418 at 429.403 kb on + strand, within GFF418 at 429.404 kb on - strand, within GFF418 at 429.404 kb on - strand, within GFF418 at 429.404 kb on - strand, within GFF418 at 429.404 kb on - strand, within GFF418 at 429.405 kb on + strand, within GFF418 at 429.405 kb on + strand, within GFF418 at 429.406 kb on - strand, within GFF418 at 429.408 kb on + strand, within GFF418 at 429.409 kb on - strand, within GFF418 at 429.409 kb on - strand, within GFF418 at 429.414 kb on + strand, within GFF418 at 429.414 kb on + strand, within GFF418 at 429.414 kb on + strand, within GFF418 at 429.415 kb on - strand, within GFF418 at 429.580 kb on + strand, within GFF418 at 429.685 kb on - strand, within GFF418 at 430.102 kb on + strand at 430.103 kb on - strand at 430.103 kb on - strand at 430.292 kb on - strand at 430.292 kb on - strand at 430.292 kb on - strand at 430.292 kb on - strand at 430.393 kb on + strand, within GFF419 at 430.393 kb on + strand, within GFF419 at 430.393 kb on + strand, within GFF419 at 430.393 kb on + strand, within GFF419 at 430.393 kb on + strand, within GFF419 at 430.394 kb on - strand, within GFF419 at 430.405 kb on + strand, within GFF419 at 430.405 kb on + strand, within GFF419 at 430.405 kb on + strand, within GFF419 at 430.799 kb on - strand, within GFF419 at 430.816 kb on + strand, within GFF419 at 430.982 kb on - strand, within GFF419
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 428,656 - GFF417 0.64 -0.2 428,727 - GFF417 0.73 +0.1 428,808 + GFF417 0.82 -0.2 429,144 + GFF418 0.11 -0.9 429,403 + GFF418 0.36 +0.2 429,404 - GFF418 0.36 -1.0 429,404 - GFF418 0.36 -1.1 429,404 - GFF418 0.36 +0.1 429,404 - GFF418 0.36 +0.3 429,405 + GFF418 0.36 -0.4 429,405 + GFF418 0.36 +0.0 429,406 - GFF418 0.36 -0.1 429,408 + GFF418 0.37 -0.5 429,409 - GFF418 0.37 +0.8 429,409 - GFF418 0.37 +0.0 429,414 + GFF418 0.37 +0.2 429,414 + GFF418 0.37 -0.1 429,414 + GFF418 0.37 +0.3 429,415 - GFF418 0.37 -1.1 429,580 + GFF418 0.53 -0.1 429,685 - GFF418 0.63 +0.3 430,102 + +0.6 430,103 - +0.5 430,103 - +1.4 430,292 - -0.5 430,292 - +0.1 430,292 - -0.0 430,292 - +0.1 430,393 + GFF419 0.14 -0.2 430,393 + GFF419 0.14 -0.2 430,393 + GFF419 0.14 +0.2 430,393 + GFF419 0.14 +0.3 430,393 + GFF419 0.14 +0.1 430,394 - GFF419 0.14 +0.3 430,405 + GFF419 0.15 -0.6 430,405 + GFF419 0.15 -0.4 430,405 + GFF419 0.15 -0.6 430,799 - GFF419 0.42 +0.6 430,816 + GFF419 0.43 -0.3 430,982 - GFF419 0.54 -0.1
Or see this region's nucleotide sequence