Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF391 and GFF392 are separated by 93 nucleotides GFF392 and GFF393 are separated by 56 nucleotides GFF393 and GFF394 are separated by 452 nucleotides
GFF391 - Aminoalkylphosphonate N-acetyltransferase, at 402,007 to 402,495
GFF391
GFF392 - Disulfide-bond oxidoreductase YfcG, at 402,589 to 403,302
GFF392
GFF393 - Beta-barrel assembly-enhancing protease, at 403,359 to 405,335
GFF393
GFF394 - hypothetical protein, at 405,788 to 406,483
GFF394
Position (kb) 403
404
405
406 Strain fitness (log2 ratio) -1
0
1 at 402.514 kb on - strand at 403.689 kb on + strand, within GFF393 at 403.689 kb on + strand, within GFF393 at 403.690 kb on - strand, within GFF393 at 403.690 kb on - strand, within GFF393 at 403.704 kb on - strand, within GFF393 at 403.704 kb on - strand, within GFF393 at 403.704 kb on - strand, within GFF393 at 403.747 kb on - strand, within GFF393 at 403.914 kb on + strand, within GFF393 at 403.992 kb on + strand, within GFF393 at 403.992 kb on + strand, within GFF393 at 403.993 kb on - strand, within GFF393 at 405.084 kb on - strand, within GFF393 at 405.415 kb on + strand at 405.775 kb on + strand at 405.775 kb on + strand at 405.775 kb on + strand at 405.776 kb on - strand at 405.900 kb on - strand, within GFF394 at 405.962 kb on + strand, within GFF394 at 406.175 kb on + strand, within GFF394 at 406.178 kb on - strand, within GFF394 at 406.251 kb on - strand, within GFF394
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 402,514 - +0.6 403,689 + GFF393 0.17 -0.2 403,689 + GFF393 0.17 -0.0 403,690 - GFF393 0.17 +0.0 403,690 - GFF393 0.17 -1.3 403,704 - GFF393 0.17 -0.7 403,704 - GFF393 0.17 -0.8 403,704 - GFF393 0.17 +0.1 403,747 - GFF393 0.20 +0.6 403,914 + GFF393 0.28 +1.2 403,992 + GFF393 0.32 +0.6 403,992 + GFF393 0.32 -0.0 403,993 - GFF393 0.32 -0.1 405,084 - GFF393 0.87 +0.1 405,415 + +0.9 405,775 + -0.2 405,775 + -0.9 405,775 + -0.7 405,776 - -1.1 405,900 - GFF394 0.16 -0.1 405,962 + GFF394 0.25 +0.6 406,175 + GFF394 0.56 +0.4 406,178 - GFF394 0.56 +0.1 406,251 - GFF394 0.67 +0.7
Or see this region's nucleotide sequence