Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3718 and GFF3719 are separated by 58 nucleotides GFF3719 and GFF3720 are separated by 2 nucleotides
GFF3718 - Epoxyqueuosine reductase, at 59,569 to 60,624
GFF3718
GFF3719 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, at 60,683 to 62,149
GFF3719
GFF3720 - PhoH-like protein, at 62,152 to 63,279
GFF3720
Position (kb) 60
61
62
63 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 59.713 kb on + strand, within GFF3718 at 59.714 kb on - strand, within GFF3718 at 59.714 kb on - strand, within GFF3718 at 59.794 kb on + strand, within GFF3718 at 59.795 kb on - strand, within GFF3718 at 59.805 kb on + strand, within GFF3718 at 59.805 kb on + strand, within GFF3718 at 59.806 kb on - strand, within GFF3718 at 59.806 kb on - strand, within GFF3718 at 60.028 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.113 kb on - strand, within GFF3718 at 60.142 kb on + strand, within GFF3718 at 60.142 kb on + strand, within GFF3718 at 60.208 kb on + strand, within GFF3718 at 60.208 kb on + strand, within GFF3718 at 60.488 kb on + strand, within GFF3718 at 60.660 kb on + strand at 60.782 kb on + strand at 60.782 kb on + strand at 60.782 kb on + strand at 60.782 kb on + strand at 60.815 kb on + strand at 60.913 kb on + strand, within GFF3719 at 61.088 kb on + strand, within GFF3719 at 61.088 kb on + strand, within GFF3719 at 61.484 kb on + strand, within GFF3719 at 61.559 kb on + strand, within GFF3719 at 61.778 kb on + strand, within GFF3719 at 61.790 kb on + strand, within GFF3719 at 62.100 kb on + strand at 62.101 kb on - strand at 62.635 kb on + strand, within GFF3720 at 62.635 kb on + strand, within GFF3720 at 62.635 kb on + strand, within GFF3720 at 62.716 kb on + strand, within GFF3720 at 62.716 kb on + strand, within GFF3720 at 62.716 kb on + strand, within GFF3720
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 59,713 + GFF3718 0.14 -1.5 59,714 - GFF3718 0.14 +3.2 59,714 - GFF3718 0.14 +0.1 59,794 + GFF3718 0.21 -0.3 59,795 - GFF3718 0.21 -1.4 59,805 + GFF3718 0.22 -1.0 59,805 + GFF3718 0.22 -0.4 59,806 - GFF3718 0.22 -0.2 59,806 - GFF3718 0.22 -0.2 60,028 - GFF3718 0.43 +0.5 60,113 - GFF3718 0.52 -0.0 60,113 - GFF3718 0.52 -0.3 60,113 - GFF3718 0.52 +0.0 60,113 - GFF3718 0.52 +0.5 60,142 + GFF3718 0.54 +0.7 60,142 + GFF3718 0.54 +1.0 60,208 + GFF3718 0.61 -0.9 60,208 + GFF3718 0.61 +2.6 60,488 + GFF3718 0.87 -1.9 60,660 + -1.8 60,782 + -0.7 60,782 + +0.8 60,782 + +2.0 60,782 + +1.9 60,815 + +0.5 60,913 + GFF3719 0.16 +2.8 61,088 + GFF3719 0.28 +1.6 61,088 + GFF3719 0.28 +2.9 61,484 + GFF3719 0.55 +0.5 61,559 + GFF3719 0.60 +0.2 61,778 + GFF3719 0.75 -0.1 61,790 + GFF3719 0.75 -1.9 62,100 + -0.4 62,101 - +2.0 62,635 + GFF3720 0.43 -0.2 62,635 + GFF3720 0.43 -0.2 62,635 + GFF3720 0.43 +1.1 62,716 + GFF3720 0.50 +0.1 62,716 + GFF3720 0.50 +0.8 62,716 + GFF3720 0.50 +0.5
Or see this region's nucleotide sequence