Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3471 and GFF3472 are separated by 48 nucleotides GFF3472 and GFF3473 overlap by 11 nucleotides
GFF3471 - hypothetical protein, at 324,967 to 326,220
GFF3471
GFF3472 - hypothetical protein, at 326,269 to 327,360
GFF3472
GFF3473 - hypothetical protein, at 327,350 to 328,510
GFF3473
Position (kb) 326
327
328 Strain fitness (log2 ratio) -2
-1
0
1
2 at 325.335 kb on + strand, within GFF3471 at 325.390 kb on + strand, within GFF3471 at 325.804 kb on + strand, within GFF3471 at 325.805 kb on - strand, within GFF3471 at 325.805 kb on - strand, within GFF3471 at 325.949 kb on - strand, within GFF3471 at 326.253 kb on - strand at 326.740 kb on + strand, within GFF3472 at 326.741 kb on - strand, within GFF3472 at 326.974 kb on + strand, within GFF3472 at 326.974 kb on + strand, within GFF3472 at 326.975 kb on - strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.298 kb on + strand at 327.299 kb on - strand at 327.299 kb on - strand at 327.317 kb on - strand at 327.317 kb on - strand at 327.955 kb on + strand, within GFF3473 at 327.956 kb on - strand, within GFF3473 at 328.230 kb on - strand, within GFF3473 at 328.247 kb on + strand, within GFF3473 at 328.247 kb on + strand, within GFF3473 at 328.247 kb on + strand, within GFF3473 at 328.248 kb on - strand, within GFF3473 at 328.325 kb on + strand, within GFF3473 at 328.325 kb on + strand, within GFF3473 at 328.325 kb on + strand, within GFF3473 at 328.325 kb on + strand, within GFF3473 at 328.326 kb on - strand, within GFF3473 at 328.326 kb on - strand, within GFF3473 at 328.326 kb on - strand, within GFF3473 at 328.327 kb on + strand, within GFF3473 at 328.328 kb on - strand, within GFF3473 at 328.328 kb on - strand, within GFF3473
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 325,335 + GFF3471 0.29 +0.3 325,390 + GFF3471 0.34 -0.3 325,804 + GFF3471 0.67 +0.7 325,805 - GFF3471 0.67 +1.8 325,805 - GFF3471 0.67 +0.4 325,949 - GFF3471 0.78 +0.6 326,253 - +0.3 326,740 + GFF3472 0.43 +0.2 326,741 - GFF3472 0.43 -0.4 326,974 + GFF3472 0.65 +1.1 326,974 + GFF3472 0.65 -1.7 326,975 - GFF3472 0.65 +0.6 327,154 + GFF3472 0.81 -0.4 327,154 + GFF3472 0.81 +0.1 327,154 + GFF3472 0.81 +1.1 327,154 + GFF3472 0.81 +0.7 327,154 + GFF3472 0.81 -0.1 327,154 + GFF3472 0.81 -0.3 327,154 + GFF3472 0.81 +1.0 327,155 - GFF3472 0.81 +1.5 327,155 - GFF3472 0.81 +0.8 327,155 - GFF3472 0.81 -1.4 327,155 - GFF3472 0.81 -0.5 327,155 - GFF3472 0.81 +0.2 327,298 + +0.4 327,299 - -0.7 327,299 - +2.0 327,317 - -0.3 327,317 - -1.2 327,955 + GFF3473 0.52 -0.3 327,956 - GFF3473 0.52 -1.4 328,230 - GFF3473 0.76 -0.8 328,247 + GFF3473 0.77 -0.1 328,247 + GFF3473 0.77 -0.5 328,247 + GFF3473 0.77 +0.3 328,248 - GFF3473 0.77 -0.1 328,325 + GFF3473 0.84 +1.4 328,325 + GFF3473 0.84 +0.4 328,325 + GFF3473 0.84 -0.3 328,325 + GFF3473 0.84 +0.1 328,326 - GFF3473 0.84 -2.6 328,326 - GFF3473 0.84 -0.1 328,326 - GFF3473 0.84 -0.4 328,327 + GFF3473 0.84 -0.5 328,328 - GFF3473 0.84 +0.4 328,328 - GFF3473 0.84 +0.6
Or see this region's nucleotide sequence