Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3462 and GFF3463 are separated by 380 nucleotides GFF3463 and GFF3464 are separated by 192 nucleotides
GFF3462 - ATP-dependent RNA helicase RhlE, at 314,647 to 316,359
GFF3462
GFF3463 - Inner membrane protein YabI, at 316,740 to 317,264
GFF3463
GFF3464 - Molybdate-binding protein ModA, at 317,457 to 318,254
GFF3464
Position (kb) 316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2 at 316.396 kb on - strand at 316.396 kb on - strand at 316.541 kb on + strand at 316.651 kb on + strand at 316.652 kb on - strand at 316.677 kb on + strand at 316.798 kb on - strand, within GFF3463 at 316.980 kb on + strand, within GFF3463 at 316.998 kb on + strand, within GFF3463 at 316.999 kb on - strand, within GFF3463 at 317.388 kb on + strand at 317.388 kb on + strand at 317.389 kb on - strand at 317.607 kb on + strand, within GFF3464 at 317.607 kb on + strand, within GFF3464 at 317.608 kb on - strand, within GFF3464 at 317.745 kb on + strand, within GFF3464 at 317.745 kb on + strand, within GFF3464 at 317.745 kb on + strand, within GFF3464 at 317.745 kb on + strand, within GFF3464 at 317.746 kb on - strand, within GFF3464 at 317.746 kb on - strand, within GFF3464 at 317.747 kb on + strand, within GFF3464 at 317.747 kb on + strand, within GFF3464 at 317.748 kb on - strand, within GFF3464 at 317.935 kb on - strand, within GFF3464 at 318.048 kb on + strand, within GFF3464 at 318.060 kb on + strand, within GFF3464 at 318.139 kb on - strand, within GFF3464 at 318.229 kb on - strand at 318.234 kb on + strand at 318.234 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 316,396 - +0.0 316,396 - -0.4 316,541 + +1.2 316,651 + +0.1 316,652 - +0.5 316,677 + -0.5 316,798 - GFF3463 0.11 +1.1 316,980 + GFF3463 0.46 -1.8 316,998 + GFF3463 0.49 +0.9 316,999 - GFF3463 0.49 -1.0 317,388 + -0.3 317,388 + -0.1 317,389 - +0.8 317,607 + GFF3464 0.19 +0.0 317,607 + GFF3464 0.19 +0.0 317,608 - GFF3464 0.19 +0.9 317,745 + GFF3464 0.36 +0.4 317,745 + GFF3464 0.36 -0.8 317,745 + GFF3464 0.36 +1.0 317,745 + GFF3464 0.36 -0.1 317,746 - GFF3464 0.36 -0.2 317,746 - GFF3464 0.36 +0.4 317,747 + GFF3464 0.36 +0.5 317,747 + GFF3464 0.36 +1.0 317,748 - GFF3464 0.36 +0.6 317,935 - GFF3464 0.60 +0.8 318,048 + GFF3464 0.74 +1.0 318,060 + GFF3464 0.76 +1.8 318,139 - GFF3464 0.85 +0.5 318,229 - +1.2 318,234 + +0.2 318,234 + +1.0
Or see this region's nucleotide sequence