Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3034 and GFF3035 are separated by 448 nucleotides GFF3035 and GFF3036 are separated by 147 nucleotides
GFF3034 - Transcriptional activator protein ExaE, at 758,879 to 759,532
GFF3034
GFF3035 - 26 kDa periplasmic immunogenic protein, at 759,981 to 760,733
GFF3035
GFF3036 - hypothetical protein, at 760,881 to 762,164
GFF3036
Position (kb) 759
760
761 Strain fitness (log2 ratio) -1
0
1
2 at 759.128 kb on - strand, within GFF3034 at 759.128 kb on - strand, within GFF3034 at 759.251 kb on + strand, within GFF3034 at 759.251 kb on + strand, within GFF3034 at 759.252 kb on - strand, within GFF3034 at 759.375 kb on - strand, within GFF3034 at 759.495 kb on - strand at 759.495 kb on - strand at 759.530 kb on + strand at 759.530 kb on + strand at 759.530 kb on + strand at 759.530 kb on + strand at 759.530 kb on + strand at 759.531 kb on - strand at 759.531 kb on - strand at 759.531 kb on - strand at 759.531 kb on - strand at 759.561 kb on - strand at 759.561 kb on - strand at 759.652 kb on - strand at 759.873 kb on + strand at 759.974 kb on + strand at 760.145 kb on + strand, within GFF3035 at 760.145 kb on + strand, within GFF3035 at 760.146 kb on - strand, within GFF3035 at 760.311 kb on + strand, within GFF3035 at 760.713 kb on + strand at 760.778 kb on - strand at 760.844 kb on - strand at 760.844 kb on - strand at 760.950 kb on + strand at 760.950 kb on + strand at 760.951 kb on - strand at 761.094 kb on + strand, within GFF3036 at 761.094 kb on + strand, within GFF3036 at 761.094 kb on + strand, within GFF3036 at 761.094 kb on + strand, within GFF3036 at 761.095 kb on - strand, within GFF3036 at 761.145 kb on + strand, within GFF3036 at 761.146 kb on - strand, within GFF3036 at 761.146 kb on - strand, within GFF3036 at 761.151 kb on + strand, within GFF3036 at 761.151 kb on + strand, within GFF3036
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 759,128 - GFF3034 0.38 -0.6 759,128 - GFF3034 0.38 -0.0 759,251 + GFF3034 0.57 +0.2 759,251 + GFF3034 0.57 +0.4 759,252 - GFF3034 0.57 +0.0 759,375 - GFF3034 0.76 -0.4 759,495 - -0.1 759,495 - +0.9 759,530 + -0.0 759,530 + +0.4 759,530 + +0.4 759,530 + +0.6 759,530 + +0.1 759,531 - +0.8 759,531 - +0.3 759,531 - +0.1 759,531 - -0.3 759,561 - -0.4 759,561 - -0.6 759,652 - +0.1 759,873 + +0.6 759,974 + +0.0 760,145 + GFF3035 0.22 -1.0 760,145 + GFF3035 0.22 +0.1 760,146 - GFF3035 0.22 +1.4 760,311 + GFF3035 0.44 +2.7 760,713 + +0.8 760,778 - -0.4 760,844 - +2.2 760,844 - +1.5 760,950 + +0.6 760,950 + +0.9 760,951 - +1.1 761,094 + GFF3036 0.17 +1.5 761,094 + GFF3036 0.17 +0.0 761,094 + GFF3036 0.17 -0.1 761,094 + GFF3036 0.17 +1.0 761,095 - GFF3036 0.17 +1.0 761,145 + GFF3036 0.21 +0.2 761,146 - GFF3036 0.21 -0.1 761,146 - GFF3036 0.21 +1.2 761,151 + GFF3036 0.21 +0.7 761,151 + GFF3036 0.21 +1.5
Or see this region's nucleotide sequence