Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF292 and GFF293 are separated by 72 nucleotides GFF293 and GFF294 overlap by 4 nucleotides
GFF292 - Isopentenyl-diphosphate delta-isomerase, at 307,273 to 308,610
GFF292
GFF293 - hypothetical protein, at 308,683 to 309,390
GFF293
GFF294 - Amidophosphoribosyltransferase, at 309,387 to 310,286
GFF294
Position (kb) 308
309
310 Strain fitness (log2 ratio) -1
0
1
2 at 307.889 kb on + strand, within GFF292 at 307.889 kb on + strand, within GFF292 at 307.890 kb on - strand, within GFF292 at 307.893 kb on - strand, within GFF292 at 307.919 kb on + strand, within GFF292 at 307.919 kb on + strand, within GFF292 at 307.919 kb on + strand, within GFF292 at 308.168 kb on + strand, within GFF292 at 308.168 kb on + strand, within GFF292 at 308.168 kb on + strand, within GFF292 at 308.169 kb on - strand, within GFF292 at 308.190 kb on - strand, within GFF292 at 308.507 kb on + strand at 308.507 kb on + strand at 308.507 kb on + strand at 308.508 kb on - strand at 308.508 kb on - strand at 308.508 kb on - strand at 308.610 kb on + strand at 308.610 kb on + strand at 308.610 kb on + strand at 308.610 kb on + strand at 308.611 kb on - strand at 308.891 kb on + strand, within GFF293 at 309.194 kb on + strand, within GFF293 at 309.195 kb on - strand, within GFF293 at 309.195 kb on - strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.409 kb on + strand at 309.478 kb on + strand, within GFF294 at 309.499 kb on + strand, within GFF294 at 309.500 kb on - strand, within GFF294 at 309.668 kb on - strand, within GFF294 at 310.080 kb on + strand, within GFF294 at 310.341 kb on + strand at 310.341 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 307,889 + GFF292 0.46 +0.0 307,889 + GFF292 0.46 -0.9 307,890 - GFF292 0.46 +0.2 307,893 - GFF292 0.46 -0.5 307,919 + GFF292 0.48 +0.9 307,919 + GFF292 0.48 +1.2 307,919 + GFF292 0.48 +0.5 308,168 + GFF292 0.67 -0.1 308,168 + GFF292 0.67 +0.2 308,168 + GFF292 0.67 +0.6 308,169 - GFF292 0.67 -0.0 308,190 - GFF292 0.69 +0.5 308,507 + +0.2 308,507 + -0.1 308,507 + +0.1 308,508 - -0.6 308,508 - +2.0 308,508 - +0.5 308,610 + -0.1 308,610 + -0.6 308,610 + -0.6 308,610 + +0.3 308,611 - -0.7 308,891 + GFF293 0.29 -0.4 309,194 + GFF293 0.72 -1.2 309,195 - GFF293 0.72 +0.3 309,195 - GFF293 0.72 -0.2 309,197 + GFF293 0.73 -1.4 309,197 + GFF293 0.73 +0.9 309,197 + GFF293 0.73 +1.4 309,197 + GFF293 0.73 +1.0 309,409 + -0.0 309,478 + GFF294 0.10 -0.3 309,499 + GFF294 0.12 -1.4 309,500 - GFF294 0.13 -1.0 309,668 - GFF294 0.31 +1.0 310,080 + GFF294 0.77 -1.2 310,341 + -0.7 310,341 + +1.0
Or see this region's nucleotide sequence