Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF277 and GFF278 overlap by 4 nucleotides GFF278 and GFF279 are separated by 117 nucleotides GFF279 and GFF280 are separated by 191 nucleotides GFF280 and GFF281 are separated by 71 nucleotides
GFF277 - Manganese import ATP-binding protein ScaC, at 292,532 to 293,272
GFF277
GFF278 - hypothetical protein, at 293,269 to 293,571
GFF278
GFF279 - Allophanate hydrolase, at 293,689 to 295,473
GFF279
GFF280 - hypothetical protein, at 295,665 to 295,883
GFF280
GFF281 - Formyltetrahydrofolate deformylase, at 295,955 to 296,824
GFF281
Position (kb) 293
294
295
296 Strain fitness (log2 ratio) -2
-1
0
1
2 at 293.007 kb on + strand, within GFF277 at 293.008 kb on - strand, within GFF277 at 293.056 kb on - strand, within GFF277 at 293.691 kb on - strand at 293.964 kb on - strand, within GFF279 at 293.964 kb on - strand, within GFF279 at 294.158 kb on + strand, within GFF279 at 294.158 kb on + strand, within GFF279 at 294.159 kb on - strand, within GFF279 at 294.221 kb on + strand, within GFF279 at 294.221 kb on + strand, within GFF279 at 294.222 kb on - strand, within GFF279 at 294.222 kb on - strand, within GFF279 at 294.296 kb on + strand, within GFF279 at 294.296 kb on + strand, within GFF279 at 294.297 kb on - strand, within GFF279 at 294.297 kb on - strand, within GFF279 at 294.437 kb on + strand, within GFF279 at 294.438 kb on - strand, within GFF279 at 294.578 kb on + strand, within GFF279 at 294.578 kb on + strand, within GFF279 at 294.579 kb on - strand, within GFF279 at 294.579 kb on - strand, within GFF279 at 294.579 kb on - strand, within GFF279 at 294.579 kb on - strand, within GFF279 at 294.579 kb on - strand, within GFF279 at 294.782 kb on + strand, within GFF279 at 294.783 kb on - strand, within GFF279 at 294.898 kb on - strand, within GFF279 at 295.086 kb on - strand, within GFF279 at 295.203 kb on - strand, within GFF279 at 295.203 kb on - strand, within GFF279 at 295.251 kb on + strand, within GFF279 at 295.397 kb on + strand at 295.398 kb on - strand at 295.478 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 293,007 + GFF277 0.64 +0.2 293,008 - GFF277 0.64 +0.6 293,056 - GFF277 0.71 -0.5 293,691 - -0.6 293,964 - GFF279 0.15 -0.2 293,964 - GFF279 0.15 +1.1 294,158 + GFF279 0.26 -0.2 294,158 + GFF279 0.26 +0.1 294,159 - GFF279 0.26 -0.1 294,221 + GFF279 0.30 -0.4 294,221 + GFF279 0.30 +0.8 294,222 - GFF279 0.30 +0.5 294,222 - GFF279 0.30 +0.1 294,296 + GFF279 0.34 -0.0 294,296 + GFF279 0.34 +0.4 294,297 - GFF279 0.34 +0.5 294,297 - GFF279 0.34 -0.5 294,437 + GFF279 0.42 -0.8 294,438 - GFF279 0.42 -1.3 294,578 + GFF279 0.50 +0.9 294,578 + GFF279 0.50 +0.6 294,579 - GFF279 0.50 +0.3 294,579 - GFF279 0.50 +0.2 294,579 - GFF279 0.50 +0.8 294,579 - GFF279 0.50 +1.8 294,579 - GFF279 0.50 +0.1 294,782 + GFF279 0.61 +0.2 294,783 - GFF279 0.61 +0.6 294,898 - GFF279 0.68 -0.5 295,086 - GFF279 0.78 -0.7 295,203 - GFF279 0.85 -0.3 295,203 - GFF279 0.85 +0.2 295,251 + GFF279 0.88 -1.9 295,397 + -0.6 295,398 - -1.1 295,478 + -0.4
Or see this region's nucleotide sequence