Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2779 and GFF2780 are separated by 15 nucleotides GFF2780 and GFF2781 are separated by 9 nucleotides GFF2781 and GFF2782 overlap by 8 nucleotides
GFF2779 - Arsenical-resistance protein Acr3, at 483,333 to 484,385
GFF2779
GFF2780 - Arsenate reductase, at 484,401 to 484,823
GFF2780
GFF2781 - Arsenate reductase, at 484,833 to 485,372
GFF2781
GFF2782 - hypothetical protein, at 485,365 to 485,727
GFF2782
Position (kb) 484
485 Strain fitness (log2 ratio) -2
-1
0
1 at 483.590 kb on - strand, within GFF2779 at 483.610 kb on + strand, within GFF2779 at 483.829 kb on + strand, within GFF2779 at 483.829 kb on + strand, within GFF2779 at 483.829 kb on + strand, within GFF2779 at 483.829 kb on + strand, within GFF2779 at 483.830 kb on - strand, within GFF2779 at 483.830 kb on - strand, within GFF2779 at 483.830 kb on - strand, within GFF2779 at 484.045 kb on + strand, within GFF2779 at 484.326 kb on + strand at 484.326 kb on + strand at 484.327 kb on - strand at 484.327 kb on - strand at 484.366 kb on + strand at 484.366 kb on + strand at 484.366 kb on + strand at 484.367 kb on - strand at 484.398 kb on + strand at 484.398 kb on + strand at 484.399 kb on - strand at 484.734 kb on + strand, within GFF2780 at 484.734 kb on + strand, within GFF2780 at 484.734 kb on + strand, within GFF2780 at 484.735 kb on - strand, within GFF2780 at 484.807 kb on + strand at 484.808 kb on - strand at 484.808 kb on - strand at 484.964 kb on - strand, within GFF2781 at 484.964 kb on - strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.174 kb on - strand, within GFF2781 at 485.174 kb on - strand, within GFF2781 at 485.495 kb on + strand, within GFF2782 at 485.495 kb on + strand, within GFF2782 at 485.495 kb on + strand, within GFF2782 at 485.507 kb on + strand, within GFF2782 at 485.507 kb on + strand, within GFF2782 at 485.507 kb on + strand, within GFF2782 at 485.508 kb on - strand, within GFF2782 at 485.508 kb on - strand, within GFF2782 at 485.508 kb on - strand, within GFF2782 at 485.762 kb on + strand at 485.762 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 483,590 - GFF2779 0.24 +0.6 483,610 + GFF2779 0.26 +0.1 483,829 + GFF2779 0.47 -0.7 483,829 + GFF2779 0.47 +0.5 483,829 + GFF2779 0.47 +0.2 483,829 + GFF2779 0.47 -2.1 483,830 - GFF2779 0.47 +0.3 483,830 - GFF2779 0.47 +0.2 483,830 - GFF2779 0.47 -0.4 484,045 + GFF2779 0.68 +0.4 484,326 + +1.1 484,326 + -0.3 484,327 - +0.3 484,327 - -0.1 484,366 + -0.2 484,366 + -0.3 484,366 + +0.6 484,367 - +0.2 484,398 + +0.2 484,398 + +0.5 484,399 - +0.6 484,734 + GFF2780 0.79 -0.4 484,734 + GFF2780 0.79 +0.3 484,734 + GFF2780 0.79 -0.8 484,735 - GFF2780 0.79 -1.0 484,807 + -0.1 484,808 - +0.0 484,808 - +0.6 484,964 - GFF2781 0.24 +0.5 484,964 - GFF2781 0.24 +0.1 485,173 + GFF2781 0.63 +0.2 485,173 + GFF2781 0.63 +0.6 485,173 + GFF2781 0.63 +0.3 485,173 + GFF2781 0.63 +0.3 485,174 - GFF2781 0.63 +0.1 485,174 - GFF2781 0.63 -2.2 485,495 + GFF2782 0.36 -0.6 485,495 + GFF2782 0.36 +0.8 485,495 + GFF2782 0.36 +0.1 485,507 + GFF2782 0.39 -0.1 485,507 + GFF2782 0.39 -0.2 485,507 + GFF2782 0.39 -0.5 485,508 - GFF2782 0.39 +0.5 485,508 - GFF2782 0.39 -0.8 485,508 - GFF2782 0.39 -0.8 485,762 + -0.9 485,762 + +0.8
Or see this region's nucleotide sequence