Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2742 and GFF2743 are separated by 8 nucleotides GFF2743 and GFF2744 overlap by 4 nucleotides
GFF2742 - hypothetical protein, at 441,313 to 442,479
GFF2742
GFF2743 - hypothetical protein, at 442,488 to 443,591
GFF2743
GFF2744 - Vitamin B12 import system permease protein BtuC, at 443,588 to 444,682
GFF2744
Position (kb) 442
443
444 Strain fitness (log2 ratio) -1
0
1 at 441.518 kb on + strand, within GFF2742 at 441.518 kb on + strand, within GFF2742 at 441.518 kb on + strand, within GFF2742 at 441.519 kb on - strand, within GFF2742 at 441.519 kb on - strand, within GFF2742 at 441.519 kb on - strand, within GFF2742 at 441.519 kb on - strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.584 kb on + strand, within GFF2742 at 441.585 kb on - strand, within GFF2742 at 441.585 kb on - strand, within GFF2742 at 441.585 kb on - strand, within GFF2742 at 441.964 kb on + strand, within GFF2742 at 441.985 kb on + strand, within GFF2742 at 441.985 kb on + strand, within GFF2742 at 441.986 kb on - strand, within GFF2742 at 441.986 kb on - strand, within GFF2742 at 441.986 kb on - strand, within GFF2742 at 441.986 kb on - strand, within GFF2742 at 442.129 kb on + strand, within GFF2742 at 442.130 kb on - strand, within GFF2742 at 442.130 kb on - strand, within GFF2742 at 442.247 kb on + strand, within GFF2742 at 442.890 kb on - strand, within GFF2743 at 442.890 kb on - strand, within GFF2743 at 442.890 kb on - strand, within GFF2743 at 442.918 kb on + strand, within GFF2743 at 442.918 kb on + strand, within GFF2743 at 443.020 kb on - strand, within GFF2743 at 443.020 kb on - strand, within GFF2743 at 443.022 kb on - strand, within GFF2743 at 443.467 kb on + strand, within GFF2743 at 443.468 kb on - strand, within GFF2743 at 443.468 kb on - strand, within GFF2743 at 443.559 kb on - strand at 443.663 kb on + strand at 443.663 kb on + strand at 443.762 kb on + strand, within GFF2744 at 443.763 kb on - strand, within GFF2744 at 443.763 kb on - strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 441,518 + GFF2742 0.18 -0.8 441,518 + GFF2742 0.18 -1.3 441,518 + GFF2742 0.18 -0.6 441,519 - GFF2742 0.18 -1.2 441,519 - GFF2742 0.18 -1.1 441,519 - GFF2742 0.18 +0.6 441,519 - GFF2742 0.18 -0.2 441,584 + GFF2742 0.23 -0.1 441,584 + GFF2742 0.23 -0.7 441,584 + GFF2742 0.23 -0.0 441,584 + GFF2742 0.23 -0.3 441,584 + GFF2742 0.23 -0.1 441,584 + GFF2742 0.23 -0.7 441,584 + GFF2742 0.23 -0.3 441,585 - GFF2742 0.23 -1.5 441,585 - GFF2742 0.23 -0.7 441,585 - GFF2742 0.23 +0.4 441,964 + GFF2742 0.56 -0.5 441,985 + GFF2742 0.58 -1.4 441,985 + GFF2742 0.58 -0.3 441,986 - GFF2742 0.58 +0.1 441,986 - GFF2742 0.58 -0.0 441,986 - GFF2742 0.58 +0.4 441,986 - GFF2742 0.58 -0.5 442,129 + GFF2742 0.70 -0.3 442,130 - GFF2742 0.70 -1.2 442,130 - GFF2742 0.70 +1.0 442,247 + GFF2742 0.80 +0.4 442,890 - GFF2743 0.36 -0.2 442,890 - GFF2743 0.36 -0.6 442,890 - GFF2743 0.36 -1.0 442,918 + GFF2743 0.39 +0.9 442,918 + GFF2743 0.39 -0.1 443,020 - GFF2743 0.48 -0.1 443,020 - GFF2743 0.48 -0.4 443,022 - GFF2743 0.48 +1.0 443,467 + GFF2743 0.89 -0.1 443,468 - GFF2743 0.89 +0.1 443,468 - GFF2743 0.89 +1.7 443,559 - +0.3 443,663 + -0.2 443,663 + -0.1 443,762 + GFF2744 0.16 -0.1 443,763 - GFF2744 0.16 -0.6 443,763 - GFF2744 0.16 -0.3 444,029 + GFF2744 0.40 +0.8 444,029 + GFF2744 0.40 +0.9 444,029 + GFF2744 0.40 -0.1 444,029 + GFF2744 0.40 +0.1 444,030 - GFF2744 0.40 +0.4 444,030 - GFF2744 0.40 -0.5 444,030 - GFF2744 0.40 -1.0 444,030 - GFF2744 0.40 -0.7 444,030 - GFF2744 0.40 -0.1
Or see this region's nucleotide sequence