Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2396 and GFF2397 are separated by 180 nucleotides GFF2397 and GFF2398 are separated by 73 nucleotides
GFF2396 - N-ethylmaleimide reductase, at 47,287 to 48,381
GFF2396
GFF2397 - Trans-2,3-dihydro-3-hydroxyanthranilate isomerase, at 48,562 to 49,467
GFF2397
GFF2398 - Pyridoxal kinase PdxY, at 49,541 to 50,389
GFF2398
Position (kb) 48
49
50 Strain fitness (log2 ratio) -1
0
1 at 47.599 kb on - strand, within GFF2396 at 47.600 kb on + strand, within GFF2396 at 47.600 kb on + strand, within GFF2396 at 47.600 kb on + strand, within GFF2396 at 47.601 kb on - strand, within GFF2396 at 47.789 kb on + strand, within GFF2396 at 47.841 kb on - strand, within GFF2396 at 47.841 kb on - strand, within GFF2396 at 47.841 kb on - strand, within GFF2396 at 47.910 kb on - strand, within GFF2396 at 48.125 kb on - strand, within GFF2396 at 48.158 kb on + strand, within GFF2396 at 48.159 kb on - strand, within GFF2396 at 48.179 kb on + strand, within GFF2396 at 48.180 kb on - strand, within GFF2396 at 48.180 kb on - strand, within GFF2396 at 48.248 kb on + strand, within GFF2396 at 48.251 kb on + strand, within GFF2396 at 48.252 kb on - strand, within GFF2396 at 48.431 kb on + strand at 48.432 kb on - strand at 48.432 kb on - strand at 48.851 kb on + strand, within GFF2397 at 48.852 kb on - strand, within GFF2397 at 48.857 kb on + strand, within GFF2397 at 48.858 kb on - strand, within GFF2397 at 48.858 kb on - strand, within GFF2397 at 49.409 kb on + strand at 49.454 kb on + strand at 49.454 kb on + strand at 49.454 kb on + strand at 49.455 kb on - strand at 49.485 kb on - strand at 49.485 kb on - strand at 49.518 kb on + strand at 49.519 kb on - strand at 49.975 kb on - strand, within GFF2398 at 50.070 kb on + strand, within GFF2398 at 50.070 kb on + strand, within GFF2398 at 50.071 kb on - strand, within GFF2398 at 50.149 kb on - strand, within GFF2398
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 47,599 - GFF2396 0.28 +1.6 47,600 + GFF2396 0.29 -0.3 47,600 + GFF2396 0.29 +0.2 47,600 + GFF2396 0.29 +0.4 47,601 - GFF2396 0.29 +0.4 47,789 + GFF2396 0.46 +1.0 47,841 - GFF2396 0.51 +1.3 47,841 - GFF2396 0.51 +0.7 47,841 - GFF2396 0.51 +0.8 47,910 - GFF2396 0.57 -0.2 48,125 - GFF2396 0.77 -0.3 48,158 + GFF2396 0.80 +0.3 48,159 - GFF2396 0.80 +1.2 48,179 + GFF2396 0.81 +0.4 48,180 - GFF2396 0.82 +1.2 48,180 - GFF2396 0.82 +0.6 48,248 + GFF2396 0.88 +0.2 48,251 + GFF2396 0.88 +0.4 48,252 - GFF2396 0.88 -0.1 48,431 + -0.0 48,432 - +1.0 48,432 - +0.2 48,851 + GFF2397 0.32 -1.3 48,852 - GFF2397 0.32 +1.1 48,857 + GFF2397 0.33 +0.6 48,858 - GFF2397 0.33 +0.6 48,858 - GFF2397 0.33 +1.2 49,409 + +0.2 49,454 + +0.2 49,454 + +0.8 49,454 + +0.1 49,455 - +0.4 49,485 - -0.0 49,485 - +0.7 49,518 + +0.6 49,519 - -0.2 49,975 - GFF2398 0.51 -0.4 50,070 + GFF2398 0.62 +0.2 50,070 + GFF2398 0.62 +0.1 50,071 - GFF2398 0.62 +0.5 50,149 - GFF2398 0.72 +1.5
Or see this region's nucleotide sequence