Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2378 and GFF2379 are separated by 115 nucleotides GFF2379 and GFF2380 are separated by 225 nucleotides GFF2380 and GFF2381 are separated by 272 nucleotides
GFF2378 - hypothetical protein, at 32,353 to 33,108
GFF2378
GFF2379 - hypothetical protein, at 33,224 to 33,601
GFF2379
GFF2380 - GTP 3',8-cyclase, at 33,827 to 34,882
GFF2380
GFF2381 - hypothetical protein, at 35,155 to 36,156
GFF2381
Position (kb) 33
34
35 Strain fitness (log2 ratio) -2
-1
0
1
2 at 33.195 kb on - strand at 33.265 kb on - strand, within GFF2379 at 33.298 kb on - strand, within GFF2379 at 33.303 kb on + strand, within GFF2379 at 33.321 kb on + strand, within GFF2379 at 33.322 kb on - strand, within GFF2379 at 33.322 kb on - strand, within GFF2379 at 33.322 kb on - strand, within GFF2379 at 33.366 kb on + strand, within GFF2379 at 33.366 kb on + strand, within GFF2379 at 33.480 kb on + strand, within GFF2379 at 33.481 kb on - strand, within GFF2379 at 33.698 kb on + strand at 33.698 kb on + strand at 33.704 kb on - strand at 33.705 kb on + strand at 33.705 kb on + strand at 33.705 kb on + strand at 33.706 kb on - strand at 33.706 kb on - strand at 33.923 kb on + strand at 33.924 kb on - strand at 33.924 kb on - strand at 33.968 kb on + strand, within GFF2380 at 33.968 kb on + strand, within GFF2380 at 34.499 kb on + strand, within GFF2380 at 34.499 kb on + strand, within GFF2380 at 34.500 kb on - strand, within GFF2380 at 34.500 kb on - strand, within GFF2380 at 34.500 kb on - strand, within GFF2380 at 34.586 kb on + strand, within GFF2380 at 34.587 kb on - strand, within GFF2380 at 34.694 kb on + strand, within GFF2380 at 34.694 kb on + strand, within GFF2380 at 34.694 kb on + strand, within GFF2380 at 34.694 kb on + strand, within GFF2380 at 34.695 kb on - strand, within GFF2380 at 34.695 kb on - strand, within GFF2380 at 34.695 kb on - strand, within GFF2380 at 34.695 kb on - strand, within GFF2380 at 34.695 kb on - strand, within GFF2380 at 34.695 kb on - strand, within GFF2380 at 34.953 kb on - strand at 35.003 kb on - strand at 35.003 kb on - strand at 35.003 kb on - strand at 35.006 kb on + strand at 35.020 kb on + strand at 35.021 kb on - strand at 35.386 kb on + strand, within GFF2381 at 35.387 kb on - strand, within GFF2381 at 35.427 kb on + strand, within GFF2381 at 35.447 kb on - strand, within GFF2381 at 35.447 kb on - strand, within GFF2381 at 35.494 kb on + strand, within GFF2381 at 35.494 kb on + strand, within GFF2381 at 35.494 kb on + strand, within GFF2381 at 35.495 kb on - strand, within GFF2381 at 35.495 kb on - strand, within GFF2381 at 35.495 kb on - strand, within GFF2381 at 35.686 kb on - strand, within GFF2381 at 35.821 kb on + strand, within GFF2381 at 35.822 kb on - strand, within GFF2381
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 33,195 - +0.5 33,265 - GFF2379 0.11 -0.9 33,298 - GFF2379 0.20 +0.7 33,303 + GFF2379 0.21 +1.0 33,321 + GFF2379 0.26 +0.3 33,322 - GFF2379 0.26 +0.4 33,322 - GFF2379 0.26 +1.0 33,322 - GFF2379 0.26 +0.5 33,366 + GFF2379 0.38 -1.0 33,366 + GFF2379 0.38 -1.1 33,480 + GFF2379 0.68 +0.0 33,481 - GFF2379 0.68 +1.5 33,698 + -0.8 33,698 + -0.0 33,704 - +0.9 33,705 + +0.6 33,705 + -1.9 33,705 + +0.1 33,706 - +1.2 33,706 - +0.6 33,923 + +1.2 33,924 - +0.3 33,924 - +1.1 33,968 + GFF2380 0.13 -0.3 33,968 + GFF2380 0.13 +1.4 34,499 + GFF2380 0.64 +0.6 34,499 + GFF2380 0.64 +0.5 34,500 - GFF2380 0.64 +0.4 34,500 - GFF2380 0.64 +1.2 34,500 - GFF2380 0.64 +0.2 34,586 + GFF2380 0.72 +0.1 34,587 - GFF2380 0.72 +1.0 34,694 + GFF2380 0.82 +1.2 34,694 + GFF2380 0.82 -0.4 34,694 + GFF2380 0.82 +0.1 34,694 + GFF2380 0.82 +0.2 34,695 - GFF2380 0.82 +0.1 34,695 - GFF2380 0.82 -0.7 34,695 - GFF2380 0.82 +1.4 34,695 - GFF2380 0.82 -0.8 34,695 - GFF2380 0.82 +0.9 34,695 - GFF2380 0.82 +0.3 34,953 - +0.1 35,003 - -1.3 35,003 - -0.1 35,003 - +0.3 35,006 + -0.3 35,020 + +1.0 35,021 - +0.5 35,386 + GFF2381 0.23 +0.3 35,387 - GFF2381 0.23 +0.4 35,427 + GFF2381 0.27 -0.6 35,447 - GFF2381 0.29 -0.3 35,447 - GFF2381 0.29 -0.3 35,494 + GFF2381 0.34 +1.0 35,494 + GFF2381 0.34 +2.6 35,494 + GFF2381 0.34 +0.3 35,495 - GFF2381 0.34 +0.1 35,495 - GFF2381 0.34 +0.6 35,495 - GFF2381 0.34 +1.1 35,686 - GFF2381 0.53 +0.6 35,821 + GFF2381 0.66 -0.2 35,822 - GFF2381 0.67 -0.6
Or see this region's nucleotide sequence