Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2216 and GFF2217 overlap by 4 nucleotides GFF2217 and GFF2218 are separated by 1 nucleotides
GFF2216 - hypothetical protein, at 920,662 to 921,699
GFF2216
GFF2217 - Ribosome-associated ATPase, at 921,696 to 924,425
GFF2217
GFF2218 - Inner membrane transport permease YhhJ, at 924,427 to 925,593
GFF2218
Position (kb) 921
922
923
924
925 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 920.731 kb on + strand at 920.732 kb on - strand at 921.322 kb on + strand, within GFF2216 at 921.322 kb on + strand, within GFF2216 at 921.323 kb on - strand, within GFF2216 at 921.583 kb on + strand, within GFF2216 at 921.584 kb on - strand, within GFF2216 at 921.679 kb on + strand at 921.682 kb on - strand at 921.759 kb on + strand at 921.759 kb on + strand at 921.997 kb on - strand, within GFF2217 at 922.752 kb on + strand, within GFF2217 at 922.752 kb on + strand, within GFF2217 at 922.752 kb on + strand, within GFF2217 at 923.223 kb on + strand, within GFF2217 at 923.223 kb on + strand, within GFF2217 at 923.223 kb on + strand, within GFF2217 at 923.223 kb on + strand, within GFF2217 at 923.223 kb on + strand, within GFF2217 at 923.224 kb on - strand, within GFF2217 at 923.225 kb on + strand, within GFF2217 at 923.225 kb on + strand, within GFF2217 at 923.225 kb on + strand, within GFF2217 at 923.225 kb on + strand, within GFF2217 at 923.226 kb on - strand, within GFF2217 at 923.226 kb on - strand, within GFF2217 at 923.226 kb on - strand, within GFF2217 at 923.226 kb on - strand, within GFF2217 at 923.226 kb on - strand, within GFF2217 at 923.424 kb on + strand, within GFF2217 at 923.501 kb on + strand, within GFF2217 at 923.704 kb on + strand, within GFF2217 at 923.705 kb on - strand, within GFF2217 at 923.712 kb on + strand, within GFF2217 at 923.712 kb on + strand, within GFF2217 at 923.712 kb on + strand, within GFF2217 at 923.713 kb on - strand, within GFF2217 at 923.713 kb on - strand, within GFF2217 at 923.772 kb on + strand, within GFF2217 at 923.772 kb on + strand, within GFF2217 at 923.808 kb on + strand, within GFF2217 at 923.853 kb on - strand, within GFF2217 at 923.853 kb on - strand, within GFF2217 at 923.940 kb on + strand, within GFF2217 at 923.940 kb on + strand, within GFF2217 at 923.941 kb on - strand, within GFF2217 at 923.941 kb on - strand, within GFF2217 at 924.102 kb on + strand, within GFF2217 at 924.285 kb on + strand at 924.286 kb on - strand at 925.264 kb on + strand, within GFF2218 at 925.264 kb on + strand, within GFF2218
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 920,731 + +0.7 920,732 - -2.9 921,322 + GFF2216 0.64 -2.3 921,322 + GFF2216 0.64 -1.4 921,323 - GFF2216 0.64 -0.6 921,583 + GFF2216 0.89 +0.5 921,584 - GFF2216 0.89 -0.3 921,679 + +1.1 921,682 - -1.4 921,759 + +0.5 921,759 + +0.4 921,997 - GFF2217 0.11 +1.1 922,752 + GFF2217 0.39 +0.7 922,752 + GFF2217 0.39 +0.1 922,752 + GFF2217 0.39 -1.4 923,223 + GFF2217 0.56 +0.2 923,223 + GFF2217 0.56 +0.8 923,223 + GFF2217 0.56 -0.1 923,223 + GFF2217 0.56 +0.5 923,223 + GFF2217 0.56 +1.3 923,224 - GFF2217 0.56 +0.9 923,225 + GFF2217 0.56 +0.3 923,225 + GFF2217 0.56 -0.1 923,225 + GFF2217 0.56 +0.5 923,225 + GFF2217 0.56 +0.7 923,226 - GFF2217 0.56 +0.6 923,226 - GFF2217 0.56 +0.3 923,226 - GFF2217 0.56 -0.0 923,226 - GFF2217 0.56 +0.5 923,226 - GFF2217 0.56 +0.1 923,424 + GFF2217 0.63 -0.2 923,501 + GFF2217 0.66 +0.1 923,704 + GFF2217 0.74 -0.6 923,705 - GFF2217 0.74 -0.1 923,712 + GFF2217 0.74 -0.4 923,712 + GFF2217 0.74 -0.9 923,712 + GFF2217 0.74 +0.6 923,713 - GFF2217 0.74 -0.0 923,713 - GFF2217 0.74 -0.5 923,772 + GFF2217 0.76 -0.4 923,772 + GFF2217 0.76 +1.4 923,808 + GFF2217 0.77 -0.0 923,853 - GFF2217 0.79 -0.4 923,853 - GFF2217 0.79 +0.5 923,940 + GFF2217 0.82 -0.1 923,940 + GFF2217 0.82 -0.3 923,941 - GFF2217 0.82 +0.1 923,941 - GFF2217 0.82 +0.2 924,102 + GFF2217 0.88 -0.2 924,285 + -1.9 924,286 - +1.3 925,264 + GFF2218 0.72 +0.4 925,264 + GFF2218 0.72 +0.4
Or see this region's nucleotide sequence