Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF152 and GFF153 are separated by 77 nucleotides GFF153 and GFF154 are separated by 7 nucleotides
GFF152 - hypothetical protein, at 162,554 to 163,603
GFF152
GFF153 - hypothetical protein, at 163,681 to 164,616
GFF153
GFF154 - sugar efflux transporter, at 164,624 to 165,805
GFF154
Position (kb) 163
164
165 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 162.904 kb on + strand, within GFF152 at 162.979 kb on - strand, within GFF152 at 162.979 kb on - strand, within GFF152 at 162.981 kb on + strand, within GFF152 at 162.981 kb on + strand, within GFF152 at 162.982 kb on - strand, within GFF152 at 162.982 kb on - strand, within GFF152 at 163.014 kb on + strand, within GFF152 at 163.014 kb on + strand, within GFF152 at 163.014 kb on + strand, within GFF152 at 163.014 kb on + strand, within GFF152 at 163.015 kb on - strand, within GFF152 at 163.015 kb on - strand, within GFF152 at 163.080 kb on + strand, within GFF152 at 163.257 kb on + strand, within GFF152 at 163.539 kb on + strand at 163.560 kb on + strand at 163.561 kb on - strand at 163.561 kb on - strand at 163.561 kb on - strand at 163.629 kb on - strand at 163.629 kb on - strand at 163.629 kb on - strand at 163.630 kb on + strand at 163.630 kb on + strand at 163.891 kb on + strand, within GFF153 at 163.891 kb on + strand, within GFF153 at 163.891 kb on + strand, within GFF153 at 163.892 kb on - strand, within GFF153 at 164.000 kb on - strand, within GFF153 at 164.023 kb on + strand, within GFF153 at 164.264 kb on - strand, within GFF153 at 164.264 kb on - strand, within GFF153 at 164.356 kb on + strand, within GFF153 at 164.356 kb on + strand, within GFF153 at 164.356 kb on + strand, within GFF153 at 164.357 kb on - strand, within GFF153 at 164.357 kb on - strand, within GFF153 at 164.357 kb on - strand, within GFF153 at 164.480 kb on - strand, within GFF153 at 164.497 kb on + strand, within GFF153 at 164.497 kb on + strand, within GFF153 at 164.498 kb on - strand, within GFF153 at 165.216 kb on + strand, within GFF154 at 165.561 kb on - strand, within GFF154
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 162,904 + GFF152 0.33 -0.2 162,979 - GFF152 0.40 -0.9 162,979 - GFF152 0.40 +1.6 162,981 + GFF152 0.41 -0.2 162,981 + GFF152 0.41 +0.9 162,982 - GFF152 0.41 +0.6 162,982 - GFF152 0.41 +0.3 163,014 + GFF152 0.44 -0.4 163,014 + GFF152 0.44 +0.5 163,014 + GFF152 0.44 -1.5 163,014 + GFF152 0.44 +0.5 163,015 - GFF152 0.44 -0.4 163,015 - GFF152 0.44 +0.4 163,080 + GFF152 0.50 -0.6 163,257 + GFF152 0.67 -1.3 163,539 + +0.3 163,560 + -1.1 163,561 - -0.5 163,561 - -1.6 163,561 - -0.0 163,629 - -0.9 163,629 - +0.8 163,629 - -0.3 163,630 + +0.1 163,630 + +0.3 163,891 + GFF153 0.22 +0.9 163,891 + GFF153 0.22 -0.8 163,891 + GFF153 0.22 -0.5 163,892 - GFF153 0.23 +1.5 164,000 - GFF153 0.34 -1.6 164,023 + GFF153 0.37 +0.1 164,264 - GFF153 0.62 -0.6 164,264 - GFF153 0.62 -0.3 164,356 + GFF153 0.72 +0.1 164,356 + GFF153 0.72 -1.1 164,356 + GFF153 0.72 -0.6 164,357 - GFF153 0.72 -0.3 164,357 - GFF153 0.72 +1.0 164,357 - GFF153 0.72 -3.1 164,480 - GFF153 0.85 +0.5 164,497 + GFF153 0.87 +0.1 164,497 + GFF153 0.87 -0.4 164,498 - GFF153 0.87 +0.5 165,216 + GFF154 0.50 -0.8 165,561 - GFF154 0.79 -1.0
Or see this region's nucleotide sequence