Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS14920

Experiment: MHII_biocarbonate_serum_Chelated; 35C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MHII_biocarbonate_serum_Chelated; 35C
3,098,879	-				-0.6
3,098,884	+				-1.3
3,098,885	-				-0.4
3,098,889	-				-0.4
3,098,906	+				-0.0
3,098,906	+				-0.7
3,098,906	+				-2.3
3,098,931	-				+2.9
3,098,931	-				-0.6
3,098,932	+				+0.7
3,098,935	+				-0.4
3,098,940	-				-1.3
3,098,940	-				-0.6
3,098,964	-				-0.3
3,098,966	-				-2.3
3,098,971	-				-0.3
3,098,971	-				-1.2
3,098,985	+				-0.1
3,098,986	-				+2.3
3,098,988	+				+0.1
3,098,988	+				-0.8
3,098,994	-				-1.0
3,099,000	-				+0.7
3,099,016	+				-0.9
3,099,026	+				-0.8
3,099,026	+				+2.3
3,099,026	+				+0.7
3,099,078	-		RR41_RS14915	0.11	+0.6
3,099,109	-		RR41_RS14915	0.15	-0.3
3,099,109	-		RR41_RS14915	0.15	-2.3
3,099,118	-		RR41_RS14915	0.16	+0.9
3,099,118	-		RR41_RS14915	0.16	-0.4
3,099,119	+		RR41_RS14915	0.16	-1.3
3,099,119	+		RR41_RS14915	0.16	-0.4
3,099,119	+		RR41_RS14915	0.16	-1.1
3,099,120	-		RR41_RS14915	0.16	+1.0
3,099,120	-		RR41_RS14915	0.16	+1.3
3,099,120	-		RR41_RS14915	0.16	+1.1
3,099,188	+		RR41_RS14915	0.26	-1.4
3,099,188	+		RR41_RS14915	0.26	+0.6
3,099,189	-		RR41_RS14915	0.26	-1.4
3,099,196	-		RR41_RS14915	0.27	+0.6
3,099,219	-		RR41_RS14915	0.30	-0.4
3,099,265	+		RR41_RS14915	0.36	+2.9
3,099,304	+		RR41_RS14915	0.42	+1.8
3,099,315	+		RR41_RS14915	0.43	-1.7
3,099,315	+		RR41_RS14915	0.43	-0.8
3,099,315	+		RR41_RS14915	0.43	-1.6
3,099,344	+		RR41_RS14915	0.47	-1.5
3,099,347	+		RR41_RS14915	0.47	+0.1
3,099,357	+		RR41_RS14915	0.49	-0.8
3,099,358	-		RR41_RS14915	0.49	-1.0
3,099,388	-		RR41_RS14915	0.53	+1.0
3,099,388	-		RR41_RS14915	0.53	+0.2
3,099,390	-		RR41_RS14915	0.53	+0.2
3,099,394	+		RR41_RS14915	0.54	-1.6
3,099,422	-		RR41_RS14915	0.58	-1.0
3,099,431	-		RR41_RS14915	0.59	-0.0
3,099,431	-		RR41_RS14915	0.59	+3.6
3,099,431	-		RR41_RS14915	0.59	-0.0
3,099,431	-		RR41_RS14915	0.59	-1.7
3,099,471	-		RR41_RS14915	0.64	-0.3
3,099,512	+		RR41_RS14915	0.70	-2.6
3,099,568	+		RR41_RS14915	0.78	-1.4
3,099,569	-		RR41_RS14915	0.78	-0.4
3,099,572	+		RR41_RS14915	0.78	-0.4
3,099,573	-		RR41_RS14915	0.78	-0.3
3,099,580	+		RR41_RS14915	0.79	-0.8
3,099,581	-		RR41_RS14915	0.79	-2.5
3,099,581	-		RR41_RS14915	0.79	-1.3
3,099,585	-		RR41_RS14915	0.80	+0.3
3,099,585	-		RR41_RS14915	0.80	-1.3
3,099,600	-		RR41_RS14915	0.82	-2.0
3,099,600	-		RR41_RS14915	0.82	-0.4
3,099,624	-		RR41_RS14915	0.85	-2.3
3,099,641	-		RR41_RS14915	0.88	+1.0
3,099,657	-		RR41_RS14915	0.90	+0.7
3,099,709	+				-0.4
3,099,709	+				+0.6
3,099,710	-				-2.0
3,099,778	+				-1.3
3,099,792	+				-1.4
3,099,795	+				-1.5
3,099,796	-				-0.4
3,099,796	-				-0.4
3,099,796	-				+0.6
3,099,798	-				-0.1
3,099,822	+				-0.4
3,099,857	-		RR41_RS14920	0.13	-0.4
3,099,934	+		RR41_RS14920	0.23	-1.3
3,099,934	+		RR41_RS14920	0.23	-2.4
3,099,934	+		RR41_RS14920	0.23	-0.6
3,099,955	+		RR41_RS14920	0.25	-1.4
3,099,955	+		RR41_RS14920	0.25	-2.3
3,099,956	-		RR41_RS14920	0.25	-0.5
3,099,956	-		RR41_RS14920	0.25	-0.3
3,099,956	-		RR41_RS14920	0.25	-0.4
3,099,970	+		RR41_RS14920	0.27	-2.4
3,100,089	+		RR41_RS14920	0.42	-1.3
3,100,098	+		RR41_RS14920	0.43	-0.4
3,100,099	-		RR41_RS14920	0.43	-1.6
3,100,107	+		RR41_RS14920	0.44	-0.4
3,100,136	+		RR41_RS14920	0.47	+0.2
3,100,136	+		RR41_RS14920	0.47	+0.6
3,100,153	+		RR41_RS14920	0.49	+0.2
3,100,181	+		RR41_RS14920	0.53	-0.8
3,100,193	+		RR41_RS14920	0.54	-1.0
3,100,193	+		RR41_RS14920	0.54	-0.0
3,100,194	-		RR41_RS14920	0.54	+0.2
3,100,204	+		RR41_RS14920	0.56	-0.4
3,100,210	+		RR41_RS14920	0.56	-1.4
3,100,280	+		RR41_RS14920	0.65	+1.6
3,100,280	+		RR41_RS14920	0.65	-1.4
3,100,307	+		RR41_RS14920	0.68	-1.3
3,100,418	+		RR41_RS14920	0.82	-0.8
3,100,418	+		RR41_RS14920	0.82	-1.0
3,100,475	+		RR41_RS14920	0.89	+2.4
3,100,475	+		RR41_RS14920	0.89	+0.1
3,100,531	+				-2.5
3,100,531	+				-2.4
3,100,548	-				-0.6
3,100,559	+				+2.4
3,100,563	+				-0.0
3,100,611	+				-1.8
3,100,612	-				-0.4
3,100,756	+		RR41_RS14925	0.32	-0.0
3,100,766	+		RR41_RS14925	0.34	-0.6
3,100,892	+		RR41_RS14925	0.62	-0.4
3,100,896	-		RR41_RS14925	0.63	+0.1
3,100,940	+		RR41_RS14925	0.72	+0.1
3,101,054	-				-1.3
3,101,101	+				-1.9
3,101,105	-				-0.6
3,101,107	-				+0.3
3,101,107	-				+0.7
3,101,114	+				-1.0
3,101,115	-				-0.6
3,101,115	-				+0.6
3,101,207	+				+0.6
3,101,261	+				+1.0
3,101,302	-		RR41_RS14930	0.15	-0.6
3,101,302	-		RR41_RS14930	0.15	-0.0
3,101,311	+		RR41_RS14930	0.16	+0.6
3,101,312	-		RR41_RS14930	0.16	-0.0
3,101,312	-		RR41_RS14930	0.16	-1.4
3,101,312	-		RR41_RS14930	0.16	+1.0
3,101,312	-		RR41_RS14930	0.16	+0.6
3,101,319	+		RR41_RS14930	0.17	-0.3
3,101,319	+		RR41_RS14930	0.17	-0.0
3,101,360	+		RR41_RS14930	0.21	+2.6
3,101,366	-		RR41_RS14930	0.22	-1.1
3,101,415	-		RR41_RS14930	0.28	-1.9
3,101,457	+		RR41_RS14930	0.32	-1.3
3,101,457	+		RR41_RS14930	0.32	-0.6
3,101,457	+		RR41_RS14930	0.32	-1.4
3,101,457	+		RR41_RS14930	0.32	-1.4
3,101,461	+		RR41_RS14930	0.33	+0.3
3,101,461	+		RR41_RS14930	0.33	+0.9
3,101,461	+		RR41_RS14930	0.33	-0.9
3,101,461	+		RR41_RS14930	0.33	+0.6
3,101,461	+		RR41_RS14930	0.33	+0.1
3,101,462	-		RR41_RS14930	0.33	-1.9
3,101,462	-		RR41_RS14930	0.33	-0.8
3,101,470	-		RR41_RS14930	0.34	-0.7
3,101,470	-		RR41_RS14930	0.34	-1.3
3,101,525	+		RR41_RS14930	0.40	+1.1
3,101,526	-		RR41_RS14930	0.40	-0.8
3,101,532	+		RR41_RS14930	0.41	-1.9
3,101,532	+		RR41_RS14930	0.41	-0.4
3,101,536	+		RR41_RS14930	0.41	-1.6
3,101,536	+		RR41_RS14930	0.41	-0.3
3,101,536	+		RR41_RS14930	0.41	-0.0
3,101,536	+		RR41_RS14930	0.41	-0.0