Experiment: MHII_biocarbonate_serum_Chelated; 35C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR41_RS13075 and RR41_RS13080 are separated by 166 nucleotides RR41_RS13080 and RR41_RS13085 are separated by 8 nucleotides
RR41_RS13075: RR41_RS13075 - hypothetical protein, at 2,723,580 to 2,723,816
_RS13075
RR41_RS13080: RR41_RS13080 - uracil-DNA glycosylase family protein, at 2,723,983 to 2,724,570
_RS13080
RR41_RS13085: RR41_RS13085 - phospholipase D-like domain-containing protein, at 2,724,579 to 2,725,436
_RS13085
Position (kb)
2723
2724 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2722.686 kb on + strand at 2722.692 kb on + strand at 2722.698 kb on + strand at 2722.903 kb on - strand at 2722.947 kb on + strand at 2723.018 kb on - strand at 2723.020 kb on - strand at 2723.092 kb on + strand at 2723.167 kb on + strand at 2723.202 kb on - strand at 2723.347 kb on + strand at 2723.426 kb on - strand at 2723.441 kb on + strand at 2723.557 kb on - strand at 2723.622 kb on - strand, within RR41_RS13075 at 2723.753 kb on - strand, within RR41_RS13075 at 2723.766 kb on - strand, within RR41_RS13075 at 2724.076 kb on - strand, within RR41_RS13080 at 2724.095 kb on - strand, within RR41_RS13080 at 2724.257 kb on + strand, within RR41_RS13080 at 2724.439 kb on - strand, within RR41_RS13080 at 2724.474 kb on - strand, within RR41_RS13080 at 2724.474 kb on - strand, within RR41_RS13080 at 2724.503 kb on - strand, within RR41_RS13080 at 2724.605 kb on - strand at 2724.702 kb on - strand, within RR41_RS13085 at 2724.717 kb on - strand, within RR41_RS13085 at 2724.720 kb on + strand, within RR41_RS13085 at 2724.738 kb on + strand, within RR41_RS13085 at 2724.739 kb on - strand, within RR41_RS13085 at 2724.760 kb on - strand, within RR41_RS13085 at 2724.764 kb on + strand, within RR41_RS13085
Per-strain Table
Position Strand Gene LocusTag Fraction MHII_biocarbonate_serum_Chelated; 35C remove 2,722,686 + -0.4 2,722,692 + -0.4 2,722,698 + -0.6 2,722,903 - +1.3 2,722,947 + +1.0 2,723,018 - +0.4 2,723,020 - -0.2 2,723,092 + -1.5 2,723,167 + +2.0 2,723,202 - +0.0 2,723,347 + -0.0 2,723,426 - +2.4 2,723,441 + +0.5 2,723,557 - +2.5 2,723,622 - RR41_RS13075 0.18 -1.5 2,723,753 - RR41_RS13075 0.73 -0.3 2,723,766 - RR41_RS13075 0.78 -1.0 2,724,076 - RR41_RS13080 0.16 -0.6 2,724,095 - RR41_RS13080 0.19 -1.0 2,724,257 + RR41_RS13080 0.47 -0.4 2,724,439 - RR41_RS13080 0.78 -1.0 2,724,474 - RR41_RS13080 0.84 +0.5 2,724,474 - RR41_RS13080 0.84 +0.7 2,724,503 - RR41_RS13080 0.88 +3.0 2,724,605 - -1.0 2,724,702 - RR41_RS13085 0.14 -0.4 2,724,717 - RR41_RS13085 0.16 -1.6 2,724,720 + RR41_RS13085 0.16 +1.1 2,724,738 + RR41_RS13085 0.19 -1.4 2,724,739 - RR41_RS13085 0.19 -0.4 2,724,760 - RR41_RS13085 0.21 +1.7 2,724,764 + RR41_RS13085 0.22 +1.1
Or see this region's nucleotide sequence