Experiment: MHII_biocarbonate_serum_Chelated; 35C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR41_RS11710 and RR41_RS11715 are separated by 274 nucleotides RR41_RS11715 and RR41_RS11720 are separated by 197 nucleotides RR41_RS11720 and RR41_RS11725 are separated by 157 nucleotides
RR41_RS11710: RR41_RS11710 - TetR/AcrR family transcriptional regulator, at 2,446,124 to 2,446,684
_RS11710
RR41_RS11715: RR41_RS11715 - hypothetical protein, at 2,446,959 to 2,447,822
_RS11715
RR41_RS11720: RR41_RS11720 - tRNA-Ile, at 2,448,020 to 2,448,096
_RS11720
RR41_RS11725: RR41_RS11725 - integrase family protein, at 2,448,254 to 2,449,486
_RS11725
Position (kb)
2446
2447
2448 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2446.443 kb on - strand, within RR41_RS11710 at 2446.561 kb on - strand, within RR41_RS11710 at 2446.789 kb on - strand at 2447.202 kb on - strand, within RR41_RS11715 at 2447.212 kb on + strand, within RR41_RS11715 at 2447.357 kb on + strand, within RR41_RS11715 at 2447.368 kb on - strand, within RR41_RS11715 at 2447.496 kb on + strand, within RR41_RS11715 at 2447.497 kb on - strand, within RR41_RS11715 at 2447.516 kb on - strand, within RR41_RS11715 at 2447.519 kb on - strand, within RR41_RS11715 at 2447.525 kb on - strand, within RR41_RS11715 at 2447.607 kb on + strand, within RR41_RS11715 at 2447.851 kb on - strand at 2447.852 kb on + strand at 2447.855 kb on - strand at 2447.949 kb on + strand at 2447.981 kb on - strand at 2448.215 kb on + strand at 2448.276 kb on + strand at 2448.357 kb on + strand at 2448.594 kb on + strand, within RR41_RS11725 at 2448.667 kb on - strand, within RR41_RS11725 at 2448.737 kb on - strand, within RR41_RS11725
Per-strain Table
Position Strand Gene LocusTag Fraction MHII_biocarbonate_serum_Chelated; 35C remove 2,446,443 - RR41_RS11710 0.57 -1.3 2,446,561 - RR41_RS11710 0.78 +0.9 2,446,789 - -0.1 2,447,202 - RR41_RS11715 0.28 -0.4 2,447,212 + RR41_RS11715 0.29 -0.5 2,447,357 + RR41_RS11715 0.46 -1.8 2,447,368 - RR41_RS11715 0.47 -0.8 2,447,496 + RR41_RS11715 0.62 -1.1 2,447,497 - RR41_RS11715 0.62 -1.7 2,447,516 - RR41_RS11715 0.64 +0.6 2,447,519 - RR41_RS11715 0.65 -0.8 2,447,525 - RR41_RS11715 0.66 -1.0 2,447,607 + RR41_RS11715 0.75 -1.4 2,447,851 - -0.6 2,447,852 + -1.3 2,447,855 - +0.3 2,447,949 + -1.3 2,447,981 - -0.7 2,448,215 + +0.9 2,448,276 + +0.0 2,448,357 + +1.9 2,448,594 + RR41_RS11725 0.28 -1.1 2,448,667 - RR41_RS11725 0.33 +1.7 2,448,737 - RR41_RS11725 0.39 +3.2
Or see this region's nucleotide sequence