Experiment: MHII_biocarbonate_serum_Chelated; 35C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR41_RS11695 and RR41_RS11700 are separated by 30 nucleotides RR41_RS11700 and RR41_RS11705 are separated by 162 nucleotides RR41_RS11705 and RR41_RS11710 are separated by 185 nucleotides
RR41_RS11695: RR41_RS11695 - Lrp/AsnC family transcriptional regulator, at 2,443,980 to 2,444,450
_RS11695
RR41_RS11700: RR41_RS11700 - YebC/PmpR family DNA-binding transcriptional regulator, at 2,444,481 to 2,445,230
_RS11700
RR41_RS11705: RR41_RS11705 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,445,393 to 2,445,938
_RS11705
RR41_RS11710: RR41_RS11710 - TetR/AcrR family transcriptional regulator, at 2,446,124 to 2,446,684
_RS11710
Position (kb)
2445
2446 Strain fitness (log2 ratio)
-1
0
1
2 at 2444.421 kb on - strand at 2444.428 kb on - strand at 2444.637 kb on + strand, within RR41_RS11700 at 2444.763 kb on + strand, within RR41_RS11700 at 2445.148 kb on + strand, within RR41_RS11700 at 2445.149 kb on - strand, within RR41_RS11700 at 2445.200 kb on + strand at 2445.200 kb on + strand at 2445.333 kb on + strand at 2445.394 kb on + strand at 2445.418 kb on + strand at 2445.517 kb on + strand, within RR41_RS11705 at 2445.525 kb on + strand, within RR41_RS11705 at 2445.575 kb on + strand, within RR41_RS11705 at 2445.624 kb on + strand, within RR41_RS11705 at 2445.628 kb on - strand, within RR41_RS11705 at 2445.677 kb on + strand, within RR41_RS11705 at 2445.765 kb on + strand, within RR41_RS11705 at 2445.770 kb on + strand, within RR41_RS11705 at 2445.789 kb on + strand, within RR41_RS11705 at 2445.956 kb on + strand at 2446.443 kb on - strand, within RR41_RS11710 at 2446.561 kb on - strand, within RR41_RS11710 at 2446.789 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MHII_biocarbonate_serum_Chelated; 35C remove 2,444,421 - +0.1 2,444,428 - +0.3 2,444,637 + RR41_RS11700 0.21 -0.4 2,444,763 + RR41_RS11700 0.38 +0.3 2,445,148 + RR41_RS11700 0.89 -0.7 2,445,149 - RR41_RS11700 0.89 +0.9 2,445,200 + +0.9 2,445,200 + -0.4 2,445,333 + +0.3 2,445,394 + -0.1 2,445,418 + +1.9 2,445,517 + RR41_RS11705 0.23 -1.6 2,445,525 + RR41_RS11705 0.24 -0.1 2,445,575 + RR41_RS11705 0.33 -0.2 2,445,624 + RR41_RS11705 0.42 -0.7 2,445,628 - RR41_RS11705 0.43 -1.3 2,445,677 + RR41_RS11705 0.52 -1.2 2,445,765 + RR41_RS11705 0.68 +0.9 2,445,770 + RR41_RS11705 0.69 +0.3 2,445,789 + RR41_RS11705 0.73 -1.4 2,445,956 + +0.3 2,446,443 - RR41_RS11710 0.57 -1.3 2,446,561 - RR41_RS11710 0.78 +0.9 2,446,789 - -0.1
Or see this region's nucleotide sequence