Experiment: MHII_biocarbonate_serum_Chelated; 35C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR41_RS06710 and RR41_RS06715 are separated by 156 nucleotides RR41_RS06715 and RR41_RS06720 are separated by 232 nucleotides
RR41_RS06710: RR41_RS06710 - 50S ribosomal protein L11 methyltransferase, at 1,389,760 to 1,390,665
_RS06710
RR41_RS06715: RR41_RS06715 - hypothetical protein, at 1,390,822 to 1,391,052
_RS06715
RR41_RS06720: RR41_RS06720 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 1,391,285 to 1,393,165
_RS06720
Position (kb)
1390
1391
1392 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1389.826 kb on + strand at 1389.827 kb on - strand at 1389.912 kb on + strand, within RR41_RS06710 at 1389.912 kb on + strand, within RR41_RS06710 at 1389.912 kb on + strand, within RR41_RS06710 at 1389.913 kb on - strand, within RR41_RS06710 at 1390.027 kb on + strand, within RR41_RS06710 at 1390.027 kb on + strand, within RR41_RS06710 at 1390.027 kb on + strand, within RR41_RS06710 at 1390.028 kb on - strand, within RR41_RS06710 at 1390.031 kb on + strand, within RR41_RS06710 at 1390.031 kb on + strand, within RR41_RS06710 at 1390.031 kb on + strand, within RR41_RS06710 at 1390.031 kb on + strand, within RR41_RS06710 at 1390.031 kb on + strand, within RR41_RS06710 at 1390.032 kb on - strand, within RR41_RS06710 at 1390.032 kb on - strand, within RR41_RS06710 at 1390.032 kb on - strand, within RR41_RS06710 at 1390.032 kb on - strand, within RR41_RS06710 at 1390.032 kb on - strand, within RR41_RS06710 at 1390.033 kb on + strand, within RR41_RS06710 at 1390.129 kb on + strand, within RR41_RS06710 at 1390.185 kb on + strand, within RR41_RS06710 at 1390.185 kb on + strand, within RR41_RS06710 at 1390.216 kb on + strand, within RR41_RS06710 at 1390.217 kb on - strand, within RR41_RS06710 at 1390.243 kb on - strand, within RR41_RS06710 at 1390.278 kb on + strand, within RR41_RS06710 at 1390.284 kb on + strand, within RR41_RS06710 at 1390.359 kb on - strand, within RR41_RS06710 at 1390.534 kb on + strand, within RR41_RS06710 at 1390.591 kb on + strand at 1390.600 kb on + strand at 1390.601 kb on - strand at 1390.649 kb on - strand at 1390.688 kb on + strand at 1390.696 kb on + strand at 1390.696 kb on + strand at 1390.696 kb on + strand at 1390.696 kb on + strand at 1390.709 kb on + strand at 1390.715 kb on - strand at 1390.715 kb on - strand at 1390.787 kb on - strand at 1390.820 kb on + strand at 1390.820 kb on + strand at 1390.821 kb on - strand at 1390.876 kb on - strand, within RR41_RS06715 at 1390.876 kb on - strand, within RR41_RS06715 at 1390.905 kb on - strand, within RR41_RS06715 at 1390.905 kb on - strand, within RR41_RS06715 at 1390.989 kb on + strand, within RR41_RS06715 at 1391.015 kb on - strand, within RR41_RS06715 at 1391.089 kb on + strand at 1391.110 kb on - strand at 1391.147 kb on + strand at 1391.218 kb on - strand at 1391.221 kb on + strand at 1391.227 kb on + strand at 1391.228 kb on - strand at 1391.824 kb on + strand, within RR41_RS06720
Per-strain Table
Position Strand Gene LocusTag Fraction MHII_biocarbonate_serum_Chelated; 35C remove 1,389,826 + +0.6 1,389,827 - -1.2 1,389,912 + RR41_RS06710 0.17 -1.4 1,389,912 + RR41_RS06710 0.17 -0.8 1,389,912 + RR41_RS06710 0.17 -0.8 1,389,913 - RR41_RS06710 0.17 +0.4 1,390,027 + RR41_RS06710 0.29 +1.4 1,390,027 + RR41_RS06710 0.29 +1.4 1,390,027 + RR41_RS06710 0.29 +1.0 1,390,028 - RR41_RS06710 0.30 -0.2 1,390,031 + RR41_RS06710 0.30 -2.1 1,390,031 + RR41_RS06710 0.30 -0.5 1,390,031 + RR41_RS06710 0.30 -0.2 1,390,031 + RR41_RS06710 0.30 -0.5 1,390,031 + RR41_RS06710 0.30 +1.8 1,390,032 - RR41_RS06710 0.30 -0.4 1,390,032 - RR41_RS06710 0.30 +0.4 1,390,032 - RR41_RS06710 0.30 -1.0 1,390,032 - RR41_RS06710 0.30 -1.8 1,390,032 - RR41_RS06710 0.30 +0.5 1,390,033 + RR41_RS06710 0.30 +0.8 1,390,129 + RR41_RS06710 0.41 -1.2 1,390,185 + RR41_RS06710 0.47 +0.8 1,390,185 + RR41_RS06710 0.47 -0.6 1,390,216 + RR41_RS06710 0.50 +1.2 1,390,217 - RR41_RS06710 0.50 -1.0 1,390,243 - RR41_RS06710 0.53 +1.0 1,390,278 + RR41_RS06710 0.57 -0.4 1,390,284 + RR41_RS06710 0.58 -1.4 1,390,359 - RR41_RS06710 0.66 -0.8 1,390,534 + RR41_RS06710 0.85 +0.8 1,390,591 + +1.8 1,390,600 + +0.2 1,390,601 - -1.0 1,390,649 - -1.0 1,390,688 + -0.7 1,390,696 + -0.0 1,390,696 + -0.8 1,390,696 + +0.4 1,390,696 + +0.0 1,390,709 + +2.2 1,390,715 - -1.4 1,390,715 - -1.0 1,390,787 - -0.2 1,390,820 + -0.8 1,390,820 + +0.2 1,390,821 - +0.4 1,390,876 - RR41_RS06715 0.23 -1.2 1,390,876 - RR41_RS06715 0.23 -0.6 1,390,905 - RR41_RS06715 0.36 +0.8 1,390,905 - RR41_RS06715 0.36 -1.4 1,390,989 + RR41_RS06715 0.72 +0.2 1,391,015 - RR41_RS06715 0.84 -0.7 1,391,089 + -0.8 1,391,110 - -0.6 1,391,147 + -0.6 1,391,218 - +0.8 1,391,221 + -1.2 1,391,227 + -1.2 1,391,228 - -1.4 1,391,824 + RR41_RS06720 0.29 +1.8
Or see this region's nucleotide sequence